Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10553 ATGATTTGCGGAGGCAAGGAGGTCAAACAGGATGATTTGACGTGCCCGCCGCCACCGCCACCGCCACCGCCGGAGTCTTCATTCATTAGGCATTCCAGTGTTGAGACCGATTTGGAGCGTCCTCCCGATTTGGAGAATCTGGATTCGGATCCGGATCCCAGCAGAAGTATCTACGACGTGTTTTTGAGTTTTAGAGGGGAAGACACTCGTGCTTCCTTCACTTCACATCTCTATGCCGCTCTTAAAAATGCCGGAATTGTTGTTTTCAGGGACGATGATTCACTTGGAAGGGGAGATGAAATTTCACCCTCACTACTGCGAGCAATCGAAGAGTCTCAAATTTCTGTTATTGTTTTCTCTAAAAATTATGCGAATTCAAGGTGGTGTCTGCAAGAGTTGGAAAAAATAATGGAGTGTCACAGAACCACAGGGCAGGTGGTTCTGCCAGTGTTCTGCGGTGTAGATCCCTCGGAAGTACGTCATCTAACAGGTGAGTTTGGAAAAGGATTTCGAGATCTTATAAACAGAACTACAATGGACGAAGACAGGATGCTGAGTCCGATGGCGCCGCTGCTGCCGCTGCTGACACGGGAGATATTGGAGAATTGGAAGAAGGCGCTTCGTGAGGCTGGTGGCATTGCAGGGTTTGTAGTCTTGAATTCCAGGACTGACAGTGAGGCTATCCAGAATGTTGTTGAGAACGTTAAAAGTTTGCTTTACAAGCAGGACTTGTTCATTACTGATAATCCAGTGGGAGTTGAATCTCGAGTGGAAGATATGATTCAACTGCTAGACAACCAGCAATCAAAATATGTTGTGCTACTAGGGATATGGGGCATGGGAGGAATTGGAAAAACAACCATTGCAAAAGCCTTTTACAATAAAATTGGCCGCAATTTTGAGGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAACAAGATGCTGGACAAGTGCGTTTACAAGGGCAACTTCTATTTGATGTCTTCAAGGAAACGACAACCAAGATACATAACATTGATTCAGGAAAAAATATATTGAAGGAGAGACTCTGCCATAAAAGAGTACTTGTTGTACTTGACGATGTGAATAAATTGGATCAACTGAATGCTTTGTGTGGAAGTCATAAATGGTTTGGTTCAGGGAGTATAATAATCATCACAACTAGAGATAAGCATATACTGACAGGGAATAGAGTTGACCGAGTATACACAATGAAAGAAATGGATGAAAGTGAATCCATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCGAGCCCTAAAGAAGATTTTGCTGGAATTTCCAGAAATGTAGTTAAATATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTCGGGTCCTATTTGTTTGATAGGGGGATAACAGAGTGGGAGTGTGTATTGGAGAAACTCAAAAGAATTCCCAATGATCAAGTACAAAAGAAGTTAAAAATAAGCTATGATGGTTTAACTGATTATACAGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACATATATTAAATGGCTGTGGACTTTTTGCAGACAATGGAGTAAGAGTCCTTATAGAAAGAAGCCTTGTAACTGTTGATGGTAAGAACAGGCTTGGAATGCATGATTTGCTTCGTGACATGGGAAGAGAAATCATTCGTGAAGAATCACCAAAGGAGCCTGGGGAGCGTAGCAGGTTATGGTTTCATGAGGATGTGGTTGATGTTTTATCAGATCAAAGTGGAACAAAAGCTGTTGAGGGACTGACTTTGAAGTTGCCAAGAACTAATACAAAATGTTTAAGTACTAAAGCATTTATGAAGATGAAGAGACTCAGATTGCTTCAACTTTCTAGTGTACAGCTTGATGGAGATTTTGAATATCTTTCACGCAATCTGAGATGGCTGTGTTGGCAAGGGTTTCCTTTAACATGCATACCTTCAAACTTTGATCAACGAAATTTAGTTTCCATTGAGTTAGAAAACAGCAATGTCAAACTTGTATGGAAAGAGGCCCAGAGGATGGAGATGCTGAAAATTCTCAATCTCAGTCATTCTCGTTATTTGACACAGACCCCAGACTTCTCAAACATGCCTAATCTTGAAAAGCTAGTACTCACCAATTGTCCAAGCTTGTCTAAGGTTTCCCATAGCATTGGACATCTCAATAAAGTGCTTCTAATAAATTTGAAAGACTGTATTAACCTTAGAAACCTTCCAAGAAGCTTCTATAAGTTGAAATCTCTGAAAACTCTCATTCTTTCTGGATGTTTAAAGATTGATAAATTGGAAGAGGACTTAGAGCAGATGGAATCTTTGACAACCTTGATTGCAGACAATACTGCAATAACAAGAGTTCCAGATGCAGTAATAAGGTCAAAAAGCATTGGATATATTTCTTTGTGTGGTTACAAAGGATTCTCACGTGATGTGTTTCCTTCTATCATTTCGTCCAGGATGTCACCAACAATTAATCCGTTATCCCTAGTTCAAACATCTGCTGCAGGCATGTCATATGTTGTATCTTTAGATGTATCAAATAGTAGTTCCCAAGAACTATCATCTATTTCCAAGGACCTTCCAAAGCTTCGAAGTCTTTGGGTGGAGTGCGGCTCTAAACTTCAGCTTTCTCGAGATGTAGCTACAATTTTGGATGCCTTATATGCCACAAATTCTAAAGAAATGGAATCAAGTGCAACCACATCATCACAAGTATCAAATCCTGCATTAATTAAATGGAGCAAAGGTTCCTGGAAATCTCTTCTAATTCAAATGGGACTGAATTGCCAAGTTACCAATATTCTGAAAGAGAGAATTTTACAGAATACAGCTGTCAGTGAGTGTGGCCATTGTTTGCTCCCCGGTGATAATTACCCGGATTGGTTAACCTTTGATTGTGAAGATTCTTCTGTAATGTTTGAAGTTCCTCAAGTGAATGGACGTAACTTGAAGACAATGATGTGCATTATCCATTATTCTGCACCAGAGATCGATTGGGAGAGCATGGATCTCATCAGAAGGACCTACGACGTGTTCTTGAGTTTTAGAGGGGAGGACACTCGTGCATCCTTCACTTCACATCTCTTTGCCTCTCTTCAGAATGACGGAATTACTGTTTCCAGGGACGATGATTCGCTTCCAAGGGGAGACCATATTTCAACCTCTCTACTGCGAGCAATCGAAGAGTCTCAGATTTCCGTTATTGTTTTCTCAAGAAATTATGCGAATTCACATTGGTGTCTGCGAGAGTTGGAGAAGATAATGGAGTGTCACAGAACCATAGGTCAGGTGGTTCTGCCGGTGTTCTATGATGTAGATCCCTCAGAAGTACGTCATCAAACAGGTGAGTTTGGAAAAGCATTTCAAGATCTTATAAACAGAACTCTAAGGGAGGAGGATGAAGTGGAGAGCTGGAGGATGGCGCTTAGCGAGGCTGGTGGCATTGCAGGGTTTGTAGTCCTAAATTCCAGGAACGAAAGTGAGGCTATCAAGGATATCGTTGAAAATATTACACGTTTGCTTGACAAGACAGATTTGTTCATTGCTGACAACCCAGTGGGAGTTGAATCTCGAGTGGAAGATATGATTCAACTGCTAGATAACAAACAATCAAATGATGTTGTACTACTAGGGATGTGGGGCATGGGGGGAATTGGTAAAACAACCATTGCAAAGGCCATTTACAACAAAATGGGCCGCAATTTTGAGGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTGTGGGAACAAGATGCTGGACAAGTGTATTTACAAGAACAACTTCTGTTTGATATCTTCAAGAAAACAACAACCAAGATACATAGCATTGAATCAGGAAAAAACATATTAAAGGAAAGACTCTGCCATAAAAGAGTACTGATTGTACTTGACGATGTGAATAAATTGGACCAACTGAATGCCTTGTGTGGAAGTCGTGAATGGTTTGGTTCAGGTAGTAGAATAATCATCACAACAAGGGATGTGCATATGCTTAGAGGGAATAGAGTTGACCAAATATACATGATGAAAGAAATGGATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCGAGTCCAAGTGGAGATTTTGTTGGAATTTCTAGAAATGTAGTTGAGTATTCTGGGGGACTGCCGCTAGCTCTTGAAGTCCTTGGATCCTATTTGTTTGATAGGGGGATAACAGAGTGGGAGAGTGTATTGGAGAAACTCAAAAGAATTCCCAATGATCAAGTACATAAGAAGTTAAAAATAAGCTATGATGGTTTAGATGATGATACAGAGAAAGAAATATTCCTTGACATAGCCTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACATATATTAAATGGATGTGGACTTTTTGCAGAAATTGGAATAAGTGTCCTTATTGAGCGAAGCCTTGTAACTGTTGATGATAAGAACAAGCTTGGAATGCATGACTTGCTGCGAGACATGGGAAGAGAAATCATTCGTGAAAAGTCCCCAAAGAAGCTCCAAAAGCGTAGTAGGTTATGGTTTCATGAGGATGTGCTTGATGTACTATCAGAACAAACAGGAACAGATGCTGTTGAGGGACTGGCTTTGAAGTTGCCAAGAACCGATAAACAACATTTGATTACTAAAGCATTTAAGAACATGAAGACACTCAGATTGCTTCAACTTGCTGGTGTACAACTTGATGGAGATTTTAAATATCTTTCAAGAAATCTCAGATGGCTGTGTTGGAATGGATTTCCTTTAACATGCATACCTGCAAACTTTTGTCAAGGAAGTTTAGTCTCCATTGAGTTAGAAAACAGCAATGTCAAACTTGTGTGGGAAAAGTCACAGAGGTTGGAGAAGTTAAAAATTCTCAATCTTAGCCATTCTCATCACTTGACACAGACCCCAGACTTTTCAAACTTGCCTAATCTTGAAAAGCTAGTACTCACAGATTGTAGAAGCCTATCTGAAATTTCCCATACCATTGGACATCTCAATAAAGTTCTTTTAATAAATTTGAAAGGCTGTGTTAGCCTTTGTAGCCTTCCAAGAAGCATCTATAAGTTGAAGTCTCTGAAAACTCTCATTCTTTCTGGATGTTTAATGATTGACAAGTTGGAAGAGGACTTGGAGCAGATGGAATCTTTGACAACCCTGATTGCAGATAACACTGCAATAACAAGAGTGCCCTTTTCATTAGTAAGGTCAAAAAGCATTGGTTATATTTCTTTGTGCGGCTATGAAGGATTCTCACGTGATGTGTTTCCTTCTATCATTTGGTCCTGGATGTCACCAACAAATAATCCGTTATCCCTAGTTCAAAACACTGCAGGCATGTCATCTGTTGTATCTTTAGATGTATCAAATAGTAGTTCCCAAGAACTATCATCTATTTCCAAGGACCTTCCAAAGCTTCGAAGTCTTTGGGTGGAGTGTGGCTCTGAACTTCAGCTTTCTCGAGATGCAGCTACAATTTTGGATGCCTTATATGCCACAAATTCAAAGGAACTGGAATCAACTGCAACTGCATCACAAGCATCAAATATTGAAACTTCTGATTTAATTGAATGCAGCAGTCAAGTGAACATTTCAGGACCAAAAAATTCCTTGAAATCTCTTTTGATTCAAATGGGAATGAATTGCCAAGTCACCAATATTCTGAAGGAAAGCATTACACAGGTTTCTCGCTCTCTCTCTCTTGCACTTATCTAA 5742 0.4007 MICGGKEVKQDDLTCPPPPPPPPPESSFIRHSSVETDLERPPDLENLDSDPDPSRSIYDVFLSFRGEDTRASFTSHLYAALKNAGIVVFRDDDSLGRGDEISPSLLRAIEESQISVIVFSKNYANSRWCLQELEKIMECHRTTGQVVLPVFCGVDPSEVRHLTGEFGKGFRDLINRTTMDEDRMLSPMAPLLPLLTREILENWKKALREAGGIAGFVVLNSRTDSEAIQNVVENVKSLLYKQDLFITDNPVGVESRVEDMIQLLDNQQSKYVVLLGIWGMGGIGKTTIAKAFYNKIGRNFEGRSFLANIREVWEQDAGQVRLQGQLLFDVFKETTTKIHNIDSGKNILKERLCHKRVLVVLDDVNKLDQLNALCGSHKWFGSGSIIIITTRDKHILTGNRVDRVYTMKEMDESESIELFSWHAFKQASPKEDFAGISRNVVKYSGGLPLALEVLGSYLFDRGITEWECVLEKLKRIPNDQVQKKLKISYDGLTDYTEKEIFLDIACFFIGMDRNDVIHILNGCGLFADNGVRVLIERSLVTVDGKNRLGMHDLLRDMGREIIREESPKEPGERSRLWFHEDVVDVLSDQSGTKAVEGLTLKLPRTNTKCLSTKAFMKMKRLRLLQLSSVQLDGDFEYLSRNLRWLCWQGFPLTCIPSNFDQRNLVSIELENSNVKLVWKEAQRMEMLKILNLSHSRYLTQTPDFSNMPNLEKLVLTNCPSLSKVSHSIGHLNKVLLINLKDCINLRNLPRSFYKLKSLKTLILSGCLKIDKLEEDLEQMESLTTLIADNTAITRVPDAVIRSKSIGYISLCGYKGFSRDVFPSIISSRMSPTINPLSLVQTSAAGMSYVVSLDVSNSSSQELSSISKDLPKLRSLWVECGSKLQLSRDVATILDALYATNSKEMESSATTSSQVSNPALIKWSKGSWKSLLIQMGLNCQVTNILKERILQNTAVSECGHCLLPGDNYPDWLTFDCEDSSVMFEVPQVNGRNLKTMMCIIHYSAPEIDWESMDLIRRTYDVFLSFRGEDTRASFTSHLFASLQNDGITVSRDDDSLPRGDHISTSLLRAIEESQISVIVFSRNYANSHWCLRELEKIMECHRTIGQVVLPVFYDVDPSEVRHQTGEFGKAFQDLINRTLREEDEVESWRMALSEAGGIAGFVVLNSRNESEAIKDIVENITRLLDKTDLFIADNPVGVESRVEDMIQLLDNKQSNDVVLLGMWGMGGIGKTTIAKAIYNKMGRNFEGRSFLANIREVWEQDAGQVYLQEQLLFDIFKKTTTKIHSIESGKNILKERLCHKRVLIVLDDVNKLDQLNALCGSREWFGSGSRIIITTRDVHMLRGNRVDQIYMMKEMDESESIELFSWHAFKQASPSGDFVGISRNVVEYSGGLPLALEVLGSYLFDRGITEWESVLEKLKRIPNDQVHKKLKISYDGLDDDTEKEIFLDIACFFIGMDRNDVIHILNGCGLFAEIGISVLIERSLVTVDDKNKLGMHDLLRDMGREIIREKSPKKLQKRSRLWFHEDVLDVLSEQTGTDAVEGLALKLPRTDKQHLITKAFKNMKTLRLLQLAGVQLDGDFKYLSRNLRWLCWNGFPLTCIPANFCQGSLVSIELENSNVKLVWEKSQRLEKLKILNLSHSHHLTQTPDFSNLPNLEKLVLTDCRSLSEISHTIGHLNKVLLINLKGCVSLCSLPRSIYKLKSLKTLILSGCLMIDKLEEDLEQMESLTTLIADNTAITRVPFSLVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPTNNPLSLVQNTAGMSSVVSLDVSNSSSQELSSISKDLPKLRSLWVECGSELQLSRDAATILDALYATNSKELESTATASQASNIETSDLIECSSQVNISGPKNSLKSLLIQMGMNCQVTNILKESITQVSRSLSLALI. 1914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10553 1913 Gene3D - 1014 1188 IPR035897 -
Seca3g10553 1913 Gene3D - 1189 1347 IPR027417 -
Seca3g10553 1913 Coils Coil 769 789 - -
Seca3g10553 1913 SUPERFAMILY Toll/Interleukin receptor TIR domain 50 215 IPR035897 -
Seca3g10553 1913 SMART AAA_5 1215 1355 IPR003593 GO:0016887
Seca3g10553 1913 SMART AAA_5 271 411 IPR003593 GO:0016887
Seca3g10553 1913 Gene3D Ribonuclease Inhibitor 1529 1909 IPR032675 -
Seca3g10553 1913 SUPERFAMILY "Winged helix" DNA-binding domain 480 586 IPR036390 -
Seca3g10553 1913 MobiDBLite consensus disorder prediction 32 52 - -
Seca3g10553 1913 Pfam NB-ARC domain 1198 1433 IPR002182 GO:0043531
Seca3g10553 1913 Pfam NB-ARC domain 254 490 IPR002182 GO:0043531
Seca3g10553 1913 SUPERFAMILY L domain-like 1544 1885 - -
Seca3g10553 1913 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 58 901 IPR044974 GO:0006952
Seca3g10553 1913 SUPERFAMILY "Winged helix" DNA-binding domain 1424 1530 IPR036390 -
Seca3g10553 1913 Gene3D - 56 236 IPR035897 -
Seca3g10553 1913 MobiDBLite consensus disorder prediction 13 27 - -
Seca3g10553 1913 Pfam TIR domain 1018 1182 IPR000157 GO:0007165
Seca3g10553 1913 Pfam TIR domain 58 175 IPR000157 GO:0007165
Seca3g10553 1913 MobiDBLite consensus disorder prediction 1 52 - -
Seca3g10553 1913 SMART till_3 57 213 IPR000157 GO:0007165
Seca3g10553 1913 SMART till_3 1017 1157 IPR000157 GO:0007165
Seca3g10553 1913 PRINTS Disease resistance protein signature 1626 1642 - -
Seca3g10553 1913 PRINTS Disease resistance protein signature 1218 1233 - -
Seca3g10553 1913 PRINTS Disease resistance protein signature 1388 1402 - -
Seca3g10553 1913 PRINTS Disease resistance protein signature 1295 1309 - -
Seca3g10553 1913 FunFam Disease resistance protein (TIR-NBS-LRR class) 1014 1185 - -
Seca3g10553 1913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1185 1448 IPR027417 -
Seca3g10553 1913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 504 IPR027417 -
Seca3g10553 1913 Gene3D - 237 403 IPR027417 -
Seca3g10553 1913 ProSiteProfiles TIR domain profile. 56 239 IPR000157 GO:0007165
Seca3g10553 1913 FunFam Disease resistance protein (TIR-NBS-LRR class) 54 241 - -
Seca3g10553 1913 SUPERFAMILY Toll/Interleukin receptor TIR domain 1010 1160 IPR035897 -
Seca3g10553 1913 SUPERFAMILY L domain-like 563 880 - -
Seca3g10553 1913 Gene3D - 1353 1437 IPR042197 -
Seca3g10553 1913 Gene3D - 409 493 IPR042197 -
Seca3g10553 1913 ProSiteProfiles TIR domain profile. 1016 1183 IPR000157 GO:0007165
Seca3g10553 1913 Gene3D Ribonuclease Inhibitor 593 896 IPR032675 -
Seca3g10553 1913 Coils Coil 1713 1733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10553 Seca-Chr3 250998267 251019749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10553 58 799 WRKY Transcription Factor Family AT4G12020 31.447 8.48e-83 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10553 - - lja:Lj0g3v0331109.1 1372.45