Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10502 ATGAAGATGCACATGAACCTGTATTGGGGCGAAGATGCCATAGTACTTTTCTCTGGATGGCCTAACCATAGTGTTGCTATGTACATCTTAGCTATCTTGTTTGTGTTTTTCCTTGCAATGTTTGCTGAGGTTCTGTCCAACCAGCCACCCATCAAGCGTGGGACTAATCCCATAAAGGGAGGGTTGGCTCAGGCTACCATCTTCTTCTTTCGCATTAGTTTCCTTTACTTGGTGATGCTGGCTGTCATGTCCTTCAACTTGGGAATCTTCATAGCTGCTGTGGCTGGCCATACCTTGGGATTCTTTTTTGCTAAGTCTCGTGCCCTTGCTATTGCCAACAGATCAGAACAACGTGGGTCCTCCATTACTGAGAAGGTTTAA 381 0.4567 MKMHMNLYWGEDAIVLFSGWPNHSVAMYILAILFVFFLAMFAEVLSNQPPIKRGTNPIKGGLAQATIFFFRISFLYLVMLAVMSFNLGIFIAAVAGHTLGFFFAKSRALAIANRSEQRGSSITEKV. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10502 126 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 116 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca3g10502 126 Pfam Ctr copper transporter family 7 46 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca3g10502 126 Pfam Ctr copper transporter family 57 103 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10502 Seca-Chr3 250285091 250285471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10502 3 108 Inorganic Solute Cotransporters AT5G59040 46.226 8.73e-28 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10502 K14686 - gmx:100808693 200.675