Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10495 ATGGCTGCACATCACGAAGAGGAAGTGAAGCTTTTGGGAGTTGTTACGAGCCCATTTGTTTACAGGGTTCAACTTGCCTTGAAACTGAAGGGAGTCCAATATGAATTCTTGGAAGATGATTTGGAAAACAAGAGCGAGGTGCTTCTCAAATACAACCCTGTTCATAAGAAGGTTCCTGTCCTTATTCACAACGAGAAGCCCATATCAGAGTCCCTTGTGATTCTTGAATATATCAACGAGACCTGGAAAGGGTATCCTATCTTGCCTGCAGAACCTTATGCAAAAGCCTTAGCTCGTTTCTGGGCCAAGTTCATTGACGAGAAGTGCATGCTTGCTATATGGAAAGCTGCATGGACTTTTGATGAGAAAGACCATGAGAAGGGTGTTAAAGAATCATACGAGGTTTTGCAAATTCTTGAGAATGAGCTTAAGGAAAAGTTCTTTGGTGGAAAAACATTTGGGATTGTGGATATTGTGGGTATCTCCCTTGCTTTTTGGCTTCCTATTATTCAACAAGTTGTAGGACTACAATTATTGACAAATGAGAAATTTCCAAAGCTTTATAACGGGAGTCAAGAAGTCATCAATCTTCATGTTGTTAAACAGACTCTACCACCTAAAGAAGCACTTTTTGTCTCCTTCAAAAATCATCATGAAAGGCTTACTACTTCAAAATGA 678 0.3982 MAAHHEEEVKLLGVVTSPFVYRVQLALKLKGVQYEFLEDDLENKSEVLLKYNPVHKKVPVLIHNEKPISESLVILEYINETWKGYPILPAEPYAKALARFWAKFIDEKCMLAIWKAAWTFDEKDHEKGVKESYEVLQILENELKEKFFGGKTFGIVDIVGISLAFWLPIIQQVVGLQLLTNEKFPKLYNGSQEVINLHVVKQTLPPKEALFVSFKNHHERLTTSK. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10495 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Seca3g10495 225 SUPERFAMILY GST C-terminal domain-like 80 220 IPR036282 -
Seca3g10495 225 Gene3D - 91 225 - -
Seca3g10495 225 FunFam Tau class glutathione S-transferase 88 224 - -
Seca3g10495 225 CDD GST_N_Tau 9 82 - -
Seca3g10495 225 Pfam Glutathione S-transferase, C-terminal domain 101 190 IPR004046 -
Seca3g10495 225 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Seca3g10495 225 FunFam Tau class glutathione S-transferase 1 90 - -
Seca3g10495 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 214 IPR010987 -
Seca3g10495 225 CDD GST_C_Tau 92 215 IPR045074 GO:0004364|GO:0006749
Seca3g10495 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 208 IPR045073 -
Seca3g10495 225 SFLD Main.3: Omega- and Tau-like 6 223 IPR045073 -
Seca3g10495 225 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Seca3g10495 225 Gene3D Glutaredoxin 2 90 - -
Seca3g10495 225 SFLD Glutathione Transferase (cytosolic) 6 223 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10495 Seca-Chr3 250193494 250195673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10495 4 224 Glutathione S-transferase Gene Family AT3G09270 51.786 5.12e-75 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10495 K00799 - gmx:547578 305.834