Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10461 ATGACCATGGAGGAGAAGCCTGTCTCTGAGAACCGAATGCTCGTGTATGTACCTCCGCATCCGTTGATCAAGCACTGGGTTTCGGTTCTGAGGAATGAACAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGTTACTAATGTATGAAGCTTCAAGGGATTGGTTGCCCACTGTTTCTGGAGAGATTCAATCACCATTGGGTGTTGCCTCAGTGGAGTTCGTTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATCTTGAGAGCTGGTCTTGCTCTTGCTGAACATGCACAATCAATCTTACCTGCAACAAAAACCTATCATCTAGGAGTAAGCAGAGATGAGGAAACTCTTCAGCCAACTGTATATTTGAACAAGTTACCCGACAAATTTCCAGACGGATCTAAAGTATTCGTCGTTGATCCTATGCTGGCAACAGGTGGTACCATAGTGGCAGCCCTGAATCTGTTAAAGGAACGTGGAGTAAGCAGCAATCAGATTAAAGTGATATCTGCTGTCGCTTCCCCTCCGGCCCTTAAAAAGCTGAGCGAGCAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGATCCAACAGTCAATGACAAAGGGTTTATAATTCCTGGTCTTGGAGATGCTGGGGACCGAAGCTATGGTACATGA 675 0.4607 MTMEEKPVSENRMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPLGVASVEFVDPREPVAVIPILRAGLALAEHAQSILPATKTYHLGVSRDEETLQPTVYLNKLPDKFPDGSKVFVVDPMLATGGTIVAALNLLKERGVSSNQIKVISAVASPPALKKLSEQFPGLHVYTGIIDPTVNDKGFIIPGLGDAGDRSYGT. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10461 224 FunFam Uracil phosphoribosyltransferase 13 224 - -
Seca3g10461 224 Pfam Uracil phosphoribosyltransferase 17 224 - -
Seca3g10461 224 Gene3D - 4 224 IPR029057 -
Seca3g10461 224 SUPERFAMILY PRTase-like 15 223 IPR029057 -
Seca3g10461 224 NCBIfam uracil phosphoribosyltransferase 15 224 IPR005765 GO:0004845|GO:0006223
Seca3g10461 224 CDD PRTases_typeI 80 200 IPR000836 -
Seca3g10461 224 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 16 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10461 Seca-Chr3 249760996 249766370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10461 11 224 PRT Gene Family AT3G53900 80.374 3.06e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10461 K00761 - gmx:100797953 419.468