Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10437 ATGATGATGATGATTTCTACTAATTCACGTTGCTATTGTCAGATTCTACTTGCTCTTCTTGCTCTTTGCTGCATGCAGATATCATCTCAGCTCCAAACCTCTCGCTCAAAGGTAGAAATCCTCCCCGGCTTTCAAGGTCCTCTTCCCTTTCAACTCGAAACAGGGTATGTGGGACTAGGGGAAAATAATGATGATGATGATATGCAGGTGTTCTACTACTTTATTAAATCAGAGAACAACCCTGAGAAAGACCCTCTTATGCTTTGGCTAACTGGTGGTCCTGGCTGCTCTTCCTTTTCTGGCCTTGTATTTCAAATAGGTCCACTTGCATTTGAAATCAAGGAGTATGATGGAAACTTGCCTAATTTGATCTTGAGGCCACAATCCTGGACAAAGGTATGTAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATCTCCTTGCTCAACGAAGTGATTGGAAATTAGTTCACCATGCCCATCAATTCCTTAGGAAGTGGCTGATTGATCACCCGGAATTTCTTTCAAATGATTTGTACATTGGAGCTGATTCATACTCCGGCATTCCTGCTCCTGCAATTGTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCCAACCATGGATAAATCTCCAGGGATATCTTCTCGGGAACCCTATAACAACACACAGAGAAAAAAATCATCAAATCCCATGTGCTCATGGAATGGGGCTTATTTCTGATGAACTCTATGAGTCACTGCAGAGAAACTGTAAAGGAGAGTATATATATATAGATTCAAGAAATGAATTGTGTTTAAAAGATGTCCAGTCCTTTGATGAGACTATATCATATCTTCAGTGCCTTTCAGGAATTAATATGTTTAACATTTTGGATCGCTTTTGCGAAGATGATTCAAAATTGTTGAGGAGATCTTTGACTCAGGAGTTGAAGGTCTCTCTTAGTCCTCATCTCACGGTGCCAGAATTAAGCTGCCAAATTTATGGTTTTTTCCTTGCCACTAAATGGGCCAATGATGCAAGTGTTCGCAAGTCACTGCATATTCGAGAGGGAACTATAGGGGAATGGAAACGTTGTTACACTACTGATTTTAAGTATGAGATCCCCAGTAGCTTTGAGTTTCATGTAAATCTCAGTGCAAAAGGCTACCGTTCCTTGATATATAGTGGAGATCATGATCTAGTTGTTCCTTTCATGTCTACACAAGCGTGGATAAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGCTTGTTGATGGCCAAGTCGCAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCTACTGTGAAGGGTTCAGGACATACAGCTCCTGAGTACAAGCCTGACGAAGGTTTTGCCATGTTCACTAGGTGGATATCTAGTAAGCCTTTGTAA 1431 0.4067 MMMMISTNSRCYCQILLALLALCCMQISSQLQTSRSKVEILPGFQGPLPFQLETGYVGLGENNDDDDMQVFYYFIKSENNPEKDPLMLWLTGGPGCSSFSGLVFQIGPLAFEIKEYDGNLPNLILRPQSWTKVCSIIFVDLPLGTGFSYAKNLLAQRSDWKLVHHAHQFLRKWLIDHPEFLSNDLYIGADSYSGIPAPAIVQEISNGNEKGLQPWINLQGYLLGNPITTHREKNHQIPCAHGMGLISDELYESLQRNCKGEYIYIDSRNELCLKDVQSFDETISYLQCLSGINMFNILDRFCEDDSKLLRRSLTQELKVSLSPHLTVPELSCQIYGFFLATKWANDASVRKSLHIREGTIGEWKRCYTTDFKYEIPSSFEFHVNLSAKGYRSLIYSGDHDLVVPFMSTQAWIRALNYSIVEDWRPWLVDGQVAGYTRTYSNRMTFATVKGSGHTAPEYKPDEGFAMFTRWISSKPL. 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10437 476 Gene3D alpha/beta hydrolase 33 475 IPR029058 -
Seca3g10437 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 460 IPR001563 GO:0004185|GO:0006508
Seca3g10437 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Seca3g10437 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185|GO:0006508
Seca3g10437 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Seca3g10437 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Seca3g10437 476 SUPERFAMILY alpha/beta-Hydrolases 41 475 IPR029058 -
Seca3g10437 476 FunFam Carboxypeptidase 379 473 - -
Seca3g10437 476 FunFam Serine carboxypeptidase-like 11 32 476 - -
Seca3g10437 476 Pfam Serine carboxypeptidase 42 472 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10437 Seca-Chr3 249430373 249436871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10437 34 67 Calmodulin-binding Proteins AT2G22960 55.882 4.41e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10437 K16296 - gmx:100780069 758.059