Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10436 ATGTTTTCTTCTACATTGAGGAATTGTCGTAGCTACCATGGGCTTTTCCTTTTGTTTGCACTTTTGTTAAGTCTCTGTTTTGACACTGCAACCTCTCGATCAAGGATTGAAGTGCTCCCTGGCTTTCAAGGCCCCCTTCCTTTTGAGCTTGAAACTGGGTATGTGGGATTAGGAGAAACAGAGGATGATCTGCAAGTGTTCTACTACTTCATTAAGTCAGAGAACAATCCAAAGAAAGATCCTCTTTTGCTTTGGTTAAGTGGTGGTCCTGGTTGCTCTTCATTTACGGGTCTCATCTACCAAATCGGTCCAATTGAATTTGAAATTAAAGAATATCCCAATGGGAGCTTGCCTGATTTGATCTTGAGGAAACCGTCCTGGACAAAGGTATGTAGCATTATTTTCATAGATTTGCCATTTGGAACCGGCTTCTCTATTGCGAAAAATGTTCGAGCACAACGAGGAGACAGGAAATTTGTTCAACATACCTATCAATTTCTTAGAAAGTGGCTGGTTGAACACTCAGAATTTCTTTCAAACAAATTGTTCATCGGTGGTGATTCATACTCTGGCATTCCTCTGCCCGCTATTGTTCATGAAATTGTTAATGGAAATGAAAAAGGTCTTCAACCACGGATGAATCTCCAGGGATATCTGCTAGGCAACCCTGTAACAGGTGGAAGTGAAAGAAATGAGAAAATCCCATATGCCCATGGAATGGGACTTATCTCTAATGAACTTTATGCGTCACTGCAGAGAAATTGTAAAGGGGAGTATGTAGATGTAGATCCCAAAAATGAATTGTGTTTAAGAGATCTGGATTACTTTAATGAGGCAAGTAATTACCATAATTGCGTTTCAGGAGTTAATAAGTACCAAATTTTGGATCCTTATTGCCTTGATTTGAGTAAGCAACGCGAAGCTCCACAAAGGAGATCTATGACTCAAAAGTTGGAGTTGGAGCCTTCTTTTGGTCATCGTTTGGCTGTCTCACAATTGCTTTGCGATCAGACTTTTCGTTATTCGCTTAGCGATACATGGATGAATCATGAAAGTGTTCGCAAAGCACTGCATGTTCGACAGGGAACTGTAGGGCGCTGGCAACGTTGTTATGCTGATGATTATGACGAAGAAATCTCTAGCAGCTTTGAGTTTCATGTAAAACTTAGTGCAAAAGGCTACCCTTCCTTAATATACAGTGGGGATCATGACTTGACTGTTCCTCACTTGTCAACGCAATCATGGATAAAGGCTCTAAACTACTCCATTGTGCATGATTGGAGGCAATGGCGTGTCGATGGCCAAGTTGCAGGATACACGAGAACTTACTCAAATAAAATGACATTTGCGACTGTGAAGGCTGCAGGACATGCAGCTTCTGAGTTCAAGCCTGATGAATGTTTTGTCATGTTCACTAGATGGATATCTAATGTGCCTTTGTAA 1443 0.4103 MFSSTLRNCRSYHGLFLLFALLLSLCFDTATSRSRIEVLPGFQGPLPFELETGYVGLGETEDDLQVFYYFIKSENNPKKDPLLLWLSGGPGCSSFTGLIYQIGPIEFEIKEYPNGSLPDLILRKPSWTKVCSIIFIDLPFGTGFSIAKNVRAQRGDRKFVQHTYQFLRKWLVEHSEFLSNKLFIGGDSYSGIPLPAIVHEIVNGNEKGLQPRMNLQGYLLGNPVTGGSERNEKIPYAHGMGLISNELYASLQRNCKGEYVDVDPKNELCLRDLDYFNEASNYHNCVSGVNKYQILDPYCLDLSKQREAPQRRSMTQKLELEPSFGHRLAVSQLLCDQTFRYSLSDTWMNHESVRKALHVRQGTVGRWQRCYADDYDEEISSSFEFHVKLSAKGYPSLIYSGDHDLTVPHLSTQSWIKALNYSIVHDWRQWRVDGQVAGYTRTYSNKMTFATVKAAGHAASEFKPDECFVMFTRWISNVPL. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10436 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Seca3g10436 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Seca3g10436 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Seca3g10436 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Seca3g10436 480 Gene3D alpha/beta hydrolase 29 480 IPR029058 -
Seca3g10436 480 FunFam Serine carboxypeptidase-like 11 30 480 - -
Seca3g10436 480 Pfam Serine carboxypeptidase 40 477 IPR001563 GO:0004185|GO:0006508
Seca3g10436 480 SUPERFAMILY alpha/beta-Hydrolases 38 479 IPR029058 -
Seca3g10436 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 464 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10436 Seca-Chr3 249397336 249404215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10436 30 59 Calmodulin-binding Proteins AT2G22960 63.333 1.99e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10436 K16296 - gmx:100780069 636.336