Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10425 ATGGATACAAACTTGACTCTAAAAGTTGGTCTTGAATTCAATAATTTAGAAGAGGCATGGAAATTTTGGATGAATTACGGAGGCATAAAAGGCTTTGGAGTTAGAAAACAATATCCAAGCAAGAGTAAGAAAGATGGTTCCGTTACGTCATACTTATATGTTTGTTGTAAGGAGGGTGTACGGAAACCAGACCCAAAGGATTATAAAACGACCAATCCAAAACCTGAGACAAGAACGAGGTGTATGGCAAAAATGAAAGTCAAACGATTCAATGAGAAATATAGAGTGATTAATTTTGTTGATGATCACAATCACCCACTGCAACCACCAGAAACAGTGCATATGTTAGCTTCTCAGCGAAAAATAACTGAACATCAAGCATATGAACTTGGAGTGGCAGAAGACACAGGGATTCAACAGAAAGCCTCATTTGATTTAATGAGTAAATATGTAGGAGGTAGAGAGAATCTAGGGTACACTAGACAAGATGCAAAGAATTATTTGAATTCGAGGAGGTGA 519 0.3719 MDTNLTLKVGLEFNNLEEAWKFWMNYGGIKGFGVRKQYPSKSKKDGSVTSYLYVCCKEGVRKPDPKDYKTTNPKPETRTRCMAKMKVKRFNEKYRVINFVDDHNHPLQPPETVHMLASQRKITEHQAYELGVAEDTGIQQKASFDLMSKYVGGRENLGYTRQDAKNYLNSRR. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10425 172 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 162 - -
Seca3g10425 172 Pfam FAR1 DNA-binding domain 21 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10425 Seca-Chr3 249254024 249254542 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g10425 FAR1 8.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10425 - - vun:114184605 285.419