Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10423 ATGGGCGAACCCATTCTCCTCCGTGACCGATGCATCCTCCGCATTAGGAACAAGTCTGTGCAGCTCTCATTTGCTCAAACTGGCTATCGCAATAGGAACAATGCTCTCTTCAAGGGGATGGCCATAATAGTTTCTGATAGTTTGTTTCCTTTTGTCTACTTTGGGTGTGGGACAGAGCCATGTCTGAAAGTTCAATTACAGGTTGTGGTTCAACGAATTAGCAGCATATTTGAACTGATACTCAATGGATTTTCTCTTTCAATACCAAGTGGCACTACTGCAGCCTTGGTTGGGCAAAGTGGGAGTGGGAAATCCATAATTGTTAGTTTGATAGAGAGATTTTATGATCCACGGGCTGGTGAAATTCTCATTGATGGCATAAACCTCAAAGAATTTCAACTGAAATGGATTAGACAGAAGATAGGCCTAGTTAGCCAGGAACCAGTTCTCTTTGCAGTAGAGCTTGCTAATGCTACCAAATTTATAGATATACTTGCTTATGTGCCTAATAATGTTTAG 519 0.4162 MGEPILLRDRCILRIRNKSVQLSFAQTGYRNRNNALFKGMAIIVSDSLFPFVYFGCGTEPCLKVQLQVVVQRISSIFELILNGFSLSIPSGTTAALVGQSGSGKSIIVSLIERFYDPRAGEILIDGINLKEFQLKWIRQKIGLVSQEPVLFAVELANATKFIDILAYVPNNV. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10423 172 PANTHER ABC TRANSPORTER B FAMILY 78 155 IPR039421 -
Seca3g10423 172 Gene3D - 80 153 IPR027417 -
Seca3g10423 172 Pfam ABC transporter 81 152 IPR003439 GO:0005524
Seca3g10423 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 157 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10423 Seca-Chr3 249249828 249250994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10423 80 165 Calmodulin-binding Proteins AT2G36910 40.741 5.76e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10423 K05658 - qsu:112005051 141.354