Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g10423 | ATGGGCGAACCCATTCTCCTCCGTGACCGATGCATCCTCCGCATTAGGAACAAGTCTGTGCAGCTCTCATTTGCTCAAACTGGCTATCGCAATAGGAACAATGCTCTCTTCAAGGGGATGGCCATAATAGTTTCTGATAGTTTGTTTCCTTTTGTCTACTTTGGGTGTGGGACAGAGCCATGTCTGAAAGTTCAATTACAGGTTGTGGTTCAACGAATTAGCAGCATATTTGAACTGATACTCAATGGATTTTCTCTTTCAATACCAAGTGGCACTACTGCAGCCTTGGTTGGGCAAAGTGGGAGTGGGAAATCCATAATTGTTAGTTTGATAGAGAGATTTTATGATCCACGGGCTGGTGAAATTCTCATTGATGGCATAAACCTCAAAGAATTTCAACTGAAATGGATTAGACAGAAGATAGGCCTAGTTAGCCAGGAACCAGTTCTCTTTGCAGTAGAGCTTGCTAATGCTACCAAATTTATAGATATACTTGCTTATGTGCCTAATAATGTTTAG | 519 | 0.4162 | MGEPILLRDRCILRIRNKSVQLSFAQTGYRNRNNALFKGMAIIVSDSLFPFVYFGCGTEPCLKVQLQVVVQRISSIFELILNGFSLSIPSGTTAALVGQSGSGKSIIVSLIERFYDPRAGEILIDGINLKEFQLKWIRQKIGLVSQEPVLFAVELANATKFIDILAYVPNNV. | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g10423 | 172 | PANTHER | ABC TRANSPORTER B FAMILY | 78 | 155 | IPR039421 | - | |
Seca3g10423 | 172 | Gene3D | - | 80 | 153 | IPR027417 | - | |
Seca3g10423 | 172 | Pfam | ABC transporter | 81 | 152 | IPR003439 | GO:0005524 | |
Seca3g10423 | 172 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 73 | 157 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g10423 | Seca-Chr3 | 249249828 | 249250994 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g10423 | 80 | 165 | Calmodulin-binding Proteins | AT2G36910 | 40.741 | 5.76e-18 | 78.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g10423 | K05658 | - | qsu:112005051 | 141.354 |