Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10418 ATGGGATGGCCTCTTATTGGCAATCTTTTAGCCTTCATGAAAAATTTCTCATCCGGTCACCCTGATTCATTCATCAACAACCTTGTTCTCAAGTATGGACGAAGTGGTATTTACAAGACTCACTTGTTTGGAAATCCAAGCATCATTATTTGTGAGCCTCAAATGTGTAAGCGAGTGCTAATAGATGATGTGAACTTTAAGCTTGGTTATCCAAAATCCACCAAAGAGTTAGCACGAAGTAGACCCATGTATGAAGTTTCTAGTGCGGAACATAGGCGTTTTCGACGCCTAATCACTGCTCCTATTGTGGGTCACAATGCATTAGCAATGTACCTAGAATGTATTTAG 348 0.4023 MGWPLIGNLLAFMKNFSSGHPDSFINNLVLKYGRSGIYKTHLFGNPSIIICEPQMCKRVLIDDVNFKLGYPKSTKELARSRPMYEVSSAEHRRFRRLITAPIVGHNALAMYLECI. 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10418 115 PANTHER CYTOCHROME P450 26 1 115 - -
Seca3g10418 115 Pfam Cytochrome P450 3 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10418 115 Gene3D Cytochrome P450 1 115 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10418 115 SUPERFAMILY Cytochrome P450 2 113 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10418 Seca-Chr3 249166283 249167494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10418 1 115 Cytochrome P450 AT1G05160 49.565 2.88e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10418 K04123 - ag:BAG68929 209.149