Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10415 ATGGCTTATCTTTCTCAGGTAATCGATGAAACATTGCGTTGTACCAACATTGCCTTTGCAACTTTTCGAGAGGCAACTACTGACATGAATATCAATGGTTATATCATACCAAAAGGATGGAGAGTGCTAGTTTGGTTAAGAGCTATTCATATGAATCTTGAATATCACTCAAATCCAGAAGAATTTAATCCATCTAGATGGGATGATTACAATGCCAAAGCAAGAACCTTCCTTCCTTTTGGAGCAGGAAGTAGGCTCTGTCCCGGAAGTGACTTAGTGAAACTTGAAATTTCCATATTTCTACATTATTTCCTCCTTAATTACAAGTTGGAGCGACTAAATCCAGAATGTCCGGTCACTACTTACTAG 369 0.3821 MAYLSQVIDETLRCTNIAFATFREATTDMNINGYIIPKGWRVLVWLRAIHMNLEYHSNPEEFNPSRWDDYNAKARTFLPFGAGSRLCPGSDLVKLEISIFLHYFLLNYKLERLNPECPVTTY. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10415 122 Gene3D Cytochrome P450 1 121 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 Pfam Cytochrome P450 1 114 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 PRINTS P450 superfamily signature 6 17 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 PRINTS P450 superfamily signature 78 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 PANTHER CYTOCHROME P450 26 1 115 - -
Seca3g10415 122 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 80 89 IPR017972 GO:0005506|GO:0016705
Seca3g10415 122 PRINTS B-class P450 signature 78 87 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 PRINTS B-class P450 signature 51 66 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 PRINTS B-class P450 signature 87 98 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 PRINTS B-class P450 signature 6 17 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 PRINTS B-class P450 signature 23 50 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10415 122 SUPERFAMILY Cytochrome P450 1 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10415 Seca-Chr3 249120923 249122311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10415 1 119 Cytochrome P450 AT2G32440 62.185 6.39e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10415 K04123 K17875 ag:BAG68929 224.557