Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10395 ATGTGTCGATGTAACAAGGGCTCCGATTCATCCATTGGGAAGCAATCTTGCATTCCCACGAAGAAGCCACAAGAGACAAGGTGGGGCTACACAACTGATTTGATGCTTTATGATGATCCATGGAAGATCAAGAAAGTCCTTAAAGAGAGTGATGTTGGCAACTTGAGTAGACTCTTGCTGCACAAAGAGTTGGTTGAGAAGTTAGTGCTTCCTATATTGGATCCTAATGCCCAAAGAGAGGCTAAGACTGAAAGAGGAACCAAAATTATCATATGGGACGTCGACACTCAATCCACGCACCATCTCGTTTTCAAGCTATGGCATTCTTCACGAAGTTACGTTTTTATTGACACTTGGACTAAAGATTTTGTCAATAGGAGGAGTTTGAAGAAAGGAGATGAAATTAAACTTCATTGGGATCCATACAACAATCGTTTTGATTTTTCTGTTATTCGTTCTTAG 462 0.4048 MCRCNKGSDSSIGKQSCIPTKKPQETRWGYTTDLMLYDDPWKIKKVLKESDVGNLSRLLLHKELVEKLVLPILDPNAQREAKTERGTKIIIWDVDTQSTHHLVFKLWHSSRSYVFIDTWTKDFVNRRSLKKGDEIKLHWDPYNNRFDFSVIRS. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10395 153 Gene3D - 40 150 IPR015300 -
Seca3g10395 153 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 15 153 - -
Seca3g10395 153 SUPERFAMILY DNA-binding pseudobarrel domain 39 147 IPR015300 -
Seca3g10395 153 CDD B3_DNA 41 152 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10395 Seca-Chr3 248779104 248779565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10395 7 140 B3 DNA Binding Superfamily AT3G24650 29.104 1.33e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10395 - - gmx:102668051 192.2