Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10381 ATGCTTCCATATCTATTGCCTCTCTTCTTCATCTTTCCCATCCTCCTCTTCTTCTTCGTGAAGAAAGAGATAGCTCCTTCATCTTCATGTAGCATCACCCTCCCAAAATCATACCCACTCATAGGTTCCTACTTGGCTATCAAAGCCAACGCCCACCGCCGTATCCAATGGTTTTCCGATATTGTCCGAATCTCACCGGCTGCCACTCTCACTCTCAACCACCCCATGGGCAGACAGCAAGTCATCACCGCCAACCCCGCCACCGTACAGCACATTCTCAAAACCCACTTCTCCAACTACCAAAAAGGCGCCAACTTCACCGGTACCCTCTCGGATTTCCTCGGAACAGGAATCTTCAACACCAACGGCGACACCTGGAAGTTCCAGAGGCAAGTAGCCAGCCACGAATTCAACACAAAATCTCTCCGTAAATTCGTCGAACACGTGGTGGACAGCGAGCTCACCAACCGTCTCATCCCCATCCTCACTTCCGCATCTACAACCAAAAACCAAGTCCTCGATTTCCAAGACATCCTCCAACGATTCGCCTTCGACAACATCTGCAAAATCGCGTTTGGCTTCGACCCAGAATACCTCACACCATCCCTCGATCGGAGCAAATTCGTGCGAGCCTTCGAACAAGCAAATGAGATCAGCAGCAAACGGTTCCGCGTGCCGTTACCCATAATCTGGAAGATGAAGAGACAACTCGGAATCGGATCGGAAAAGCAACTGCGTGAGGCGGTGAATGAAGTGCGTGAATTCGCGAAGAACATAGTGAGGGAAAAGAAGCAGGAGATGAAGGTAAAAGCATCGCTAGAATCTGTGGACTTACTATCGCGGTTTGAAGATTTTGTGACGGATATAGTGATAAGTTTTATATTAGCGGGGAAGGATACGACGTCGTCGGCGCTGACGTGGTTTTTCTGGCTGTTGTGGAAGAATCCAAGGGTAGAGGAAGAGATTGTGAAGGAGATAAGAGAGAAACCGGAAGTTCCGGTATACGATGACGTGAAGGAGATGGTTTACACACACGCGGCGCTTTGTGAGAGCATGAGGCTTTACCCACCTGTGGCGATGGATAGTAAGGAGGCGATGAACGACGACGTTTTACCGGATGGTACGGTTGTGAAGAAAGGGATGGTGGTGATTTATCATGTGTACGCAATGGGGAGGATGGAGAATGTTTGGGGTAGTGATTGGGCCAAGTTTCGGCCCGAAAGGTGGTTAGAGAGGGATGGGTCTGAGTCATCAAAGTGGCGGTTCGTTGGGAGAGATTCTTTCACGTATCCGGTTTTTCAAGCGGGTCCAAGGATTTGTTTGGGGAAGGAAATGGCTTTTCTGCAAATGAAGAGATTGGTGGCTGGCGTTCTGAGCCGGTTCACGGTGGTGCCGTTGTCTCATTTAGCTGAACACCCAAACTTCATTTCCTTCTTGACTTCCTAA 1446 0.4945 MLPYLLPLFFIFPILLFFFVKKEIAPSSSCSITLPKSYPLIGSYLAIKANAHRRIQWFSDIVRISPAATLTLNHPMGRQQVITANPATVQHILKTHFSNYQKGANFTGTLSDFLGTGIFNTNGDTWKFQRQVASHEFNTKSLRKFVEHVVDSELTNRLIPILTSASTTKNQVLDFQDILQRFAFDNICKIAFGFDPEYLTPSLDRSKFVRAFEQANEISSKRFRVPLPIIWKMKRQLGIGSEKQLREAVNEVREFAKNIVREKKQEMKVKASLESVDLLSRFEDFVTDIVISFILAGKDTTSSALTWFFWLLWKNPRVEEEIVKEIREKPEVPVYDDVKEMVYTHAALCESMRLYPPVAMDSKEAMNDDVLPDGTVVKKGMVVIYHVYAMGRMENVWGSDWAKFRPERWLERDGSESSKWRFVGRDSFTYPVFQAGPRICLGKEMAFLQMKRLVAGVLSRFTVVPLSHLAEHPNFISFLTS. 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10381 481 SUPERFAMILY Cytochrome P450 35 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 Gene3D Cytochrome P450 27 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 CDD CYP86A 75 465 - -
Seca3g10381 481 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 Pfam Cytochrome P450 35 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10381 481 Coils Coil 245 265 - -
Seca3g10381 481 PANTHER CYTOCHROME P450 24 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10381 Seca-Chr3 248607391 248608857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10381 5 481 Cytochrome P450 AT5G63450 48.247 6.81e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10381 K20769 K13407 ag:AAD10204 701.049