Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10358 ATGCTGTGTTGGTGGCTTCTGTTTCTTTACCTTACCATATCCCTTTTGGAACAGGTTTATAATGTGACAAAGTTCTTAGAGGACCACCCTGGTGGGGATGAGGTCCTGTTGTCTTCCACAGGGAAAGATGCATCTAATGATTTTGACGATATTGGTCACAGCACCAGTGCAGTAGCTATGATGGATGAGTTTTATGTTGGAGACATTGATACATCAACCATTCCTTCTAAGGTTAAGTACACTCCTCCAAAGCAACCTCACTATAATCAGGACAAGACACCAGAGTTCATCATCAGGGTGCTCCAATTTCTAATTCCCTTGTTTATCTTGGGTTTGGCAGTTGGTGTTCGTTTCTACACCAAATCATCATAA 372 0.4194 MLCWWLLFLYLTISLLEQVYNVTKFLEDHPGGDEVLLSSTGKDASNDFDDIGHSTSAVAMMDEFYVGDIDTSTIPSKVKYTPPKQPHYNQDKTPEFIIRVLQFLIPLFILGLAVGVRFYTKSS. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10358 123 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 25 32 IPR018506 GO:0020037
Seca3g10358 123 Pfam Cytochrome b5-like Heme/Steroid binding domain 15 69 IPR001199 -
Seca3g10358 123 Gene3D - 9 73 IPR036400 -
Seca3g10358 123 PANTHER CYTOCHROME B5 13 120 - -
Seca3g10358 123 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 70 IPR001199 -
Seca3g10358 123 PRINTS Cytochrome B5 signature 19 29 IPR001199 -
Seca3g10358 123 PRINTS Cytochrome B5 signature 29 43 IPR001199 -
Seca3g10358 123 PRINTS Cytochrome B5 signature 57 69 IPR001199 -
Seca3g10358 123 PRINTS Cytochrome B5 signature 44 51 IPR001199 -
Seca3g10358 123 SMART Cyt_b5_2 8 70 IPR001199 -
Seca3g10358 123 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 15 80 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10358 Seca-Chr3 248399712 248402301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10358 3 122 NADPH P450 reductases AT2G32720 72.500 6.10e-62 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10358 K23490 - gmx:100500611 211.075