Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10313 ATGGCTTTCTCTGCCCCTAAATTCTACAACATGTTTCTATTCCTCTGCCTTGCCCTCCTCCTTTTCTCCACATGGGAGGTACAAGCAAATCTTTGTCAAAGGCATAGCACAACATGGAGAGGCCCTTGTACAGACACTGGAGACTGTAAAAATCAGTGTATCAACGTGGAACACGCTACTTTTGGGGCTTGTCACGCTGAAGGCCTTGGTTTTGCTTGCTTCTGCTACTTCAATTGCTGA 240 0.4625 MAFSAPKFYNMFLFLCLALLLFSTWEVQANLCQRHSTTWRGPCTDTGDCKNQCINVEHATFGACHAEGLGFACFCYFNC. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10313 79 SMART gth_4 31 79 IPR003614 GO:0006952
Seca3g10313 79 PANTHER DEFENSIN-LIKE PROTEIN 1 4 76 - -
Seca3g10313 79 Gene3D - 31 79 IPR036574 -
Seca3g10313 79 SUPERFAMILY Scorpion toxin-like 30 79 IPR036574 -
Seca3g10313 79 Pfam Gamma-thionin family 31 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10313 Seca-Chr3 247841422 247842132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10313 9 79 Plant Defensins Gene Families AT1G19610 50.000 7.37e-21 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10313 - - mtr:25500300 121.709