Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10312 ATGGCTTTTGCTCCTAAATTCTACAACATGTTTCTATTCCTCTGCCTTGCCCTCCTCCTTTTCTCCACATGGGAGGTAGAAGCAAAAGTTTGTCAAAGGCGAAGCAAAACATGGTCAGGGCCTTGTTTTAACACGGGTGGCTGTAAAAATCAGTGCATCAAAGTGGAACATGCAACTTTTGGCGCTTGTCACCGTTCAGGCTTTGGTTTTGCTTGCTTCTGTTACTTCAACTGCTAA 237 0.443 MAFAPKFYNMFLFLCLALLLFSTWEVEAKVCQRRSKTWSGPCFNTGGCKNQCIKVEHATFGACHRSGFGFACFCYFNC. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10312 78 Pfam Gamma-thionin family 29 78 - -
Seca3g10312 78 Gene3D - 30 78 IPR036574 -
Seca3g10312 78 SUPERFAMILY Scorpion toxin-like 28 78 IPR036574 -
Seca3g10312 78 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Seca3g10312 78 PANTHER DEFENSIN-LIKE PROTEIN 1 7 75 - -
Seca3g10312 78 SMART gth_4 30 78 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10312 Seca-Chr3 247826266 247830020 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10312 8 78 Plant Defensins Gene Families AT1G19610 55.405 5.43e-24 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10312 - - lja:Lj3g3v0720000.1 140.969