Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10310 ATGGATAACAAGGAAATCCCTTTTACACCTGCAACACCAGGGACTCCTGGTGCTCCTCTTTTCAGTGGGTTCAAGTCTAAGAAAGCTAGGAATGGTATTGGTATTGGTATTGGCAGGAAGTCCCTCCTCAAGGATTGCAAATGTGTAAGTGTTGAAAAAATGGACCTTAGAAGATGGAGCCTTGCCCAGACTCTCTTGTTCTTTGCCACCCTCTCCTATCCCTATTGCCAAAAGGTAGGAGCTGAGTTTATAGGTACATTCGTTCTCATGTTTGCTGGGACAACCACTGCTATTGTGAACCAAAAGATAAATCCTGCTGTCACCATTTCCTTTGCTGCATTAAAGTACTTCCCATTGAAGAAGATAATTCATAGGGATGTTGAAAGACAAAGGAAGACTCATGTTTATCCTATGTGCATCACTCCTATCTGCACTTCGTTTCTGAGCTCATCAAGTTTTTGTTGGTTATTATATATGTACAAGGATCGATGTGATGTTAGTTGCGTTTCAACCCAAGTAAATGGGAGGATATTTCATACTATTAAGACTCAGGTGGAGGACCTGACATGCCTTGATCTTGCTATAGGCTGCAATACAATCTGGATCATGCAATCGTGTTGTCAAGCGCTAGCAATTAAGTTACAAGCATGTTTTTCTCTGCTCCTAAATTCTACACCATGTTTATGCTCCTCTGCTTTGCCTTCCTCCTTTTCTCCACATGGGAGGTGCAAGCAAATCTTTGTCAGAGGAAAAGCACAACATGGTCAGGGCCTTGTTTTAACACAGGGGGCTGTAAAAATCAGTGCATCAACGTGGAACATGCAGCTTTCGGAGCTTGTCATGATCTTACTTACTTCTGCTACTTCAATTGCTGAGCTTTGA 882 0.4229 MDNKEIPFTPATPGTPGAPLFSGFKSKKARNGIGIGIGRKSLLKDCKCVSVEKMDLRRWSLAQTLLFFATLSYPYCQKVGAEFIGTFVLMFAGTTTAIVNQKINPAVTISFAALKYFPLKKIIHRDVERQRKTHVYPMCITPICTSFLSSSSFCWLLYMYKDRCDVSCVSTQVNGRIFHTIKTQVEDLTCLDLAIGCNTIWIMQSCCQALAIKLQACFSLLLNSTPCLCSSALPSSFSPHGRCKQIFVRGKAQHGQGLVLTQGAVKISASTWNMQLSELVMILLTSATSIAEL. 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10310 293 SUPERFAMILY Aquaporin-like 71 123 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10310 Seca-Chr3 247817943 247823486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10310 1 122 Major Intrinsic Protein MIP AT1G80760 44.172 6.08e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10310 K09874 - rcu:8259747 117.857