Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10308 ATGGCTTCCTTTACGTCTAAATTCTACAGCATGTTTCTGTTTCTGTGCCTTGCCCTCCTCCTTTTCTCCACATTGGCAGAGGTAGAAGCAAAAGTTTGTCAAAGGCGTAGCAAAACATGGACAGGGCCCTGTTTAATCACAGGAAGCTGTAAAAATCAGTGCGTCAACGTCGAACACGCAACTTTTGGCGCTTGTCACCGCTCAGGCATCGGTTTTGCCTGCTTCTGTTACTTCAACTGCTGA 243 0.4691 MASFTSKFYSMFLFLCLALLLFSTLAEVEAKVCQRRSKTWTGPCLITGSCKNQCVNVEHATFGACHRSGIGFACFCYFNC. 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10308 80 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Seca3g10308 80 Pfam Gamma-thionin family 31 80 - -
Seca3g10308 80 Gene3D - 32 80 IPR036574 -
Seca3g10308 80 SMART gth_4 32 80 IPR003614 GO:0006952
Seca3g10308 80 SUPERFAMILY Scorpion toxin-like 30 80 IPR036574 -
Seca3g10308 80 PANTHER DEFENSIN-LIKE PROTEIN 1 5 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10308 Seca-Chr3 247800944 247801789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10308 9 80 Plant Defensins Gene Families AT1G19610 52.703 1.14e-22 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10308 - - mtr:25500300 116.316