Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10285 ATGTGCAAGTATTGTGGCTACTCATTCCCCTCCAACTCCAAAGAACTCCCCATGGATCCTGCTTCTTATGTTCAAACCATTGCAGGAATCTTAGCCCTCTTGGTTCTATACTTTGTGTTTAGATCCATTAGATCACCTAATGGACCTAAAGAATATAAAAGCAGCACCAATTACAACAAAGTACCCGAACCATGTGGTGCTTTACCCCTTATAGGCCATCTCCATCTTCTCAGCGCTAGTAAGCCATATTTCAGGACCTTTTCAGCCATGGCCCAGAAATATGGCCCAATATTCTCCCTCAGGCTCGGTTGCCACCACACCATAGTGGTGAACAACAGGGAAATTGCCAAGGAATTTCTCATAACAAATGACAAAGTTTTTGCCTCAAGGGCTAACATAGCTGCTGGGAGATACATTGGTTACAACAATGCCATTTTTGGTCTTGCCCCTTATGGAAATTATTGGCGTGAAATGAGAAAAATTGCTACCCTTGAGCTTTTATCAAGTCATAGGCTTGAAAAGCTAAAGCATGTGAGGGAAACAGATATATTCTCTTGTCAAAGACTTGTACTCATTTGCAAAGAATTTGATGAATGA 597 0.4154 MCKYCGYSFPSNSKELPMDPASYVQTIAGILALLVLYFVFRSIRSPNGPKEYKSSTNYNKVPEPCGALPLIGHLHLLSASKPYFRTFSAMAQKYGPIFSLRLGCHHTIVVNNREIAKEFLITNDKVFASRANIAAGRYIGYNNAIFGLAPYGNYWREMRKIATLELLSSHRLEKLKHVRETDIFSCQRLVLICKEFDE. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10285 198 Gene3D Cytochrome P450 49 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10285 198 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10285 198 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10285 198 Pfam Cytochrome P450 63 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10285 198 SUPERFAMILY Cytochrome P450 58 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g10285 198 PANTHER CYTOCHROME P450 82C3-RELATED 31 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10285 Seca-Chr3 247545449 247546045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10285 31 183 Cytochrome P450 AT3G25180 48.366 5.03e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca3g10285 p450 8.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10285 K17961 - gmx:100787489 249.98