Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10271 ATGAGTGAGATGGACTTTAATAGTGATGATTCAGCTGCTAATCTGGATGATGATAGGGACGTAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGGAAATGATATACATAGTGATGAGGGAAATGAGTCTATTCACCCAGAGGCTGATATGGATGAGGAGAATGATGTTATGGATACTGATGTTAGAGACGATGTGTCAATGAGGATAATTGACTTGACAAATGATGATATAAGGGCTTTGGAGTTCGCTAGTGAAGAGCATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTAAAGAATTTGCTATGAGGAAGGATGATGTTATTCGAGACAAAAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTCTGAGGGACAAAAAGCATTTGATTAGGTTAGATCGGAAAAAGGAACACCGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGATTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATAAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGTTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAATAATCTAATGTTTTTTTTCAAGATTTTTATGTTCTGA 843 0.376 MSEMDFNSDDSAANLDDDRDVSYSDSSSSHEMTSGNDIHSDEGNESIHPEADMDEENDVMDTDVRDDVSMRIIDLTNDDIRALEFASEEHAFNFYFSYAKCKEFAMRKDDVIRDKKGMVIMRQYLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKTGKWKIVSFEESHNHDLTPAKFVPLIPNYRGLTDGDKAQVDALHSHGIRPCQIMGFLVDKKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDVVAGLSYLQGKADNNLMFFFKIFMF. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10271 280 MobiDBLite consensus disorder prediction 1 57 - -
Seca3g10271 280 Pfam FAR1 DNA-binding domain 93 183 IPR004330 -
Seca3g10271 280 PANTHER OS01G0519700 PROTEIN 82 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10271 Seca-Chr3 247418421 247419263 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g10271 FAR1 6.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10271 - - ccaj:109794460 280.026