Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10263 ATGGAAAGATATAAAATTTTGAGAGAGCTTGGAGATGGTTCTTGCGGTCACGTATATAAAGCCCGCGATATGAGAACTTATGAGATTGTTGCTGTCAAAAGGTTGAAAAGAAAGTTTTGTTTCTGGGAAGAATACTCAAATTTAAGAGAAGTTAAGGCCCTCCGCAAAATGAATCACCCAAATATCATAAAGTTGAAAGAGGTTGTTAAAGAAAATAATGAACTGTTTTTCATTTTTGAATACATGGATTGTAATCTTTATCATTTAATAAAAGAGAGAGAAAAGCCCTTTTCAGAGGAAGAGATACGGTGCTTTTTGAAGCAAGTGCTTCAAGGGCTTAGTCATGTGCACAAGAAAGGATTCTTTCATAGAGATTTAAAACCTGAAAATTTGCTAGTGACAAATGATGTTCTTAAAATTGCTGATTTTGGATTGGCTAGAGAAGTATCATCGATGCCTCCGTATACTCAATATGTTTCCACACGGTGGTACCGAGCTCCAGAAGTTTTGTTGCAGTCCCCATGTTATACTCCTGCTGTTGACATGTGGGCTGTTGGTGCTATATTAGCAGAGCTTTTTACTTTGACCCCCATATTTCCTGGTGAAAGTGAAATAGATCAACTGTACAAAATATACCGCGTTCTTGGTATGCCAGATTTATCTGCTTTCACCATAGGGGCAAACGACTCTCGGCTATTGGACCTTGTTGGTCATGAAGTTGTTCCACCTATGAAGCTTTCTGATATCATTCCAAATGCTAGCTTGGAAGCTATAGATTTGATCACACAACTGTTATCATGGGACCCATCAAGAAGGCCAGATGCAGATCAGTCACTGCAACATCCTTTTTTCCATGTGGATAGATGGGTTCCTTGTCCGCTCAATGATCCACTTGAGCTGAAGCTGAGTAGCAAGAGGGCAAAGCCAAATCTTGAGCTCAAACTGCAGGATTTTGGTCCAGATCCCGATGATTGTTTTCTTGGCTTGACATTAGCTGTAAAGCCCAGTGTTTCAAACTTGGATGTGGTCCAAAATGCATCTCAGGGTATGAGAGAGAATGTGCTATTTTGCTCGGATTTTAATGAACATTCAGACCAGTCAGTATTTTGGACATTATTATCTCCTGATCAAAATGGAGTCCATAACTCAGCAGAAACTTCATTGTCATTGTCATTTGGGTAA 1182 0.3942 MERYKILRELGDGSCGHVYKARDMRTYEIVAVKRLKRKFCFWEEYSNLREVKALRKMNHPNIIKLKEVVKENNELFFIFEYMDCNLYHLIKEREKPFSEEEIRCFLKQVLQGLSHVHKKGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAVGAILAELFTLTPIFPGESEIDQLYKIYRVLGMPDLSAFTIGANDSRLLDLVGHEVVPPMKLSDIIPNASLEAIDLITQLLSWDPSRRPDADQSLQHPFFHVDRWVPCPLNDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSVSNLDVVQNASQGMRENVLFCSDFNEHSDQSVFWTLLSPDQNGVHNSAETSLSLSFG. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10263 393 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Seca3g10263 393 SUPERFAMILY Protein kinase-like (PK-like) 1 286 IPR011009 -
Seca3g10263 393 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g10263 393 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 291 - -
Seca3g10263 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Seca3g10263 393 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 308 - -
Seca3g10263 393 CDD STKc_MAK_like 4 284 - -
Seca3g10263 393 Gene3D Transferase(Phosphotransferase) domain 1 82 284 - -
Seca3g10263 393 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g10263 393 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g10263 393 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10263 Seca-Chr3 247319488 247334136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10263 7 284 MAP Kinase Gene Family AT4G01370 39.649 1.82e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Seca3g10263 Pkinase 1.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10263 K08829 K08830 gmx:100792842 750.74