Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10239 ATGTGCAGGGAAAGAGAAACTATTGAGGGATTGGTTTTGAAGTTGCAAAAAACAGGCAGAGTTTGCTTCAGTACTGATGCTTTCAGGGAGATGAAGAAACTGAGACTTTTACAGCTTGATCGTGTTGACCTCACTGGAGATTATGTGTATCTTTCCAAACAACTTATATGGATCCATTGGCAGGGATTTACCTTCAACTATATACCTGATTACTTTTATCAAGGAAATCTAGTTGTTATTGTCTTAAAATACAACAATAGTAAACAAGTTTGGAAGGAAACCAAGTTGTTGTTGCAGCTAAAAATTCTCAATCTCAGTCATTCTAGGTACTTAAAAAACACCCCTGACTTTTCTAAACTTCCAAATCTAGAAAAGCTCATTATGAAGGATTGTCCAAGTTTGTCTGAGGTAGACCAGTCCATTGGAGATCTGAGTAATCTTGTTCTGATAAATTTGAAGGACTGTACAAGCCTAGCAATCTCCCAAGGAAGATCTATCAATTGA 504 0.3671 MCRERETIEGLVLKLQKTGRVCFSTDAFREMKKLRLLQLDRVDLTGDYVYLSKQLIWIHWQGFTFNYIPDYFYQGNLVVIVLKYNNSKQVWKETKLLLQLKILNLSHSRYLKNTPDFSKLPNLEKLIMKDCPSLSEVDQSIGDLSNLVLINLKDCTSLAISQGRSIN. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10239 167 Gene3D Ribonuclease Inhibitor 9 163 IPR032675 -
Seca3g10239 167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 158 IPR044974 GO:0006952
Seca3g10239 167 SUPERFAMILY L domain-like 14 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10239 Seca-Chr3 246989066 246989689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10239 6 158 WRKY Transcription Factor Family AT5G45050 30.488 1.57e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10239 - - lja:Lj3g3v0744690.1 245.743