Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10228 ATGATTATAAATAGAAGAACTGAAGGTGAACTAGTGAAGGAAATTGTTGAGGACGTTCTGACAAAACTAAACAGCACAATCTTGTCTATTATTGAATTTCCAGTTGGATTAGAATCCCGCGTGCAAAAGGTGATTGGGTTTATCAAATTTCAATCAAGCAAACAAGTTTGCATAATAGGGATATGGGGAATGGGAGGGTCGGGTAAAAAGACCACAGCCAAAGCCATCTACAATCAAATTCATCGCGAATTTGTGGATAGAAGTTTCCTTGAAAATATTAGAGAAGTTTGTGAAAAAGATAGTAGAGGGCTTGTTCATTTACAACAACAACTGCTTTCAGATGTCCTGAAAACAAAGGTCAAGATACACAGCATTGCCATGGGGACAGCTCTGATCCACAAAAGACTTTCTTGGAAAAGGGCACTCGTTGTACTTGATGATGTGACCACGTTTGAGCAATTAAAAGCCCTATGTGGAGATCAAGCAAGTCCAAGAGAAGACTTTAGGGAACTCTCTAGAAATGCAGCTGGTTACTGTGGAGGATTGCCACTAGCTCTTGAAGTTATTGGATCTTACTTATATGAAAGGACGAAACCAGAATGGAAAAGTGTAATATCAAAACTAGAGAGAATTCCCAATGATCAAGTGCAAGAGAAACTGAGAATAAGTTATGATGGTTTAAAGGATGATATGCAAAAGGACATATTTCTTGACATATGTTGTTTCTTTATCGGGAAGGATAGAGCCTATGTTACAGAGATACTAAATGGCTGTGGACTTTATGCTGATATTGGAATAACAGTCCTTATAGAGAGGAGCCTTCTAAAAGTTGAAAAGAATAACAAGCTTCAAATGCATACTTTATACATGAGGAATGGCCATTAA 885 0.3763 MIINRRTEGELVKEIVEDVLTKLNSTILSIIEFPVGLESRVQKVIGFIKFQSSKQVCIIGIWGMGGSGKKTTAKAIYNQIHREFVDRSFLENIREVCEKDSRGLVHLQQQLLSDVLKTKVKIHSIAMGTALIHKRLSWKRALVVLDDVTTFEQLKALCGDQASPREDFRELSRNAAGYCGGLPLALEVIGSYLYERTKPEWKSVISKLERIPNDQVQEKLRISYDGLKDDMQKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGITVLIERSLLKVEKNNKLQMHTLYMRNGH. 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10228 294 PRINTS Disease resistance protein signature 135 149 - -
Seca3g10228 294 PRINTS Disease resistance protein signature 58 73 - -
Seca3g10228 294 Gene3D - 35 140 IPR027417 -
Seca3g10228 294 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 169 289 IPR044974 GO:0006952
Seca3g10228 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 239 IPR027417 -
Seca3g10228 294 Gene3D - 145 228 IPR042197 -
Seca3g10228 294 Pfam NB-ARC domain 38 157 IPR002182 GO:0043531
Seca3g10228 294 Pfam NB-ARC domain 163 223 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10228 Seca-Chr3 246938158 246939188 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10228 35 288 WRKY Transcription Factor Family AT5G45050 30.065 7.22e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10228 - - cam:101511388 424.476