Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10224 ATGCTATACCTTCCAATTCACGGGGAAGGGAAAAAAAGGAAAAAGAAAAAAAAACTGATGGCATTGGTGGGAGAAGCATTACTCTCTGCTTCTGTTCAGGTGCTGGTTGACAGGATTGCCTCTACTGATTTGAAGAATTTCTTTTGCAGCAAAGGACATGATCTTTCAATACTGAATAAGCTGAAGATGACACTGTTGACCCTTCGTGCTGTGTTAAATGATGCTGGGGAGAAGCATATCACGAATCCTGCAGTGCATGAGTGGCTTTTTGATCTCAAGGATGCTTTGTTTGATGCTGATAACTTGCTGGATGAAATCAACACAAGGGCTTTAGCACGCAAGATAGAAGCTGAGTCACAAAGTTTTAGTGATAAGGTGTGGAATTTCCTTTCGTCTCCTTTCAAAAGACTTAGAGGGGGGATGGATTATGAACTAGAAGAGTTACTTGAAAAGTTGGAATATTTTGTGAAGCAGAAGGATATCCTTGGGTTGAGAGAAGGTGTTTCTAAGAGTGTTTGGCATGGAACAGCTGCAACATCTGTGGTTGGTCAATCTACTATATATGGTAGAGATGATGACATGGACAAACTTAAAAAATATTTACTTTCAGATGATGGGTGTGATGATCATGTGGGAGTGATTACTATTGTTGGCATGGGAGGGCTTGGGAAAACAACACTTGCTCAACTCCTTTACAATGACAAAGAAGTAAAAGGGTATTTTAATTTGAGAGCCTGGGCCTATATTACCAAGGAGTTTGATGTTTTCAGGGTGACTAAAACCTTACTTGAGTCTGTTAGTTCAAAGCCTGTTGTCACTAATAATCTAGATGCTCTACAAGTTGAATTGCAGCAAAGCTTAAGTGGTAGGAAATTTTTGTTTGTATTGGATGATTTATGGGATACTTACAATGACTGGAACAGACTGAAAGCCATTCTCAAGTCTGGGGATGTGGGAAGTAGGGTGATTGTCACGACACGCCAGGAAAATGTTGCCTTGGCTATGAATACCTTTCCTATCTACTATCTGAGGCCCCTGTCACACCAACATTGTTGGGATCTACTTGCTGAAAATGCATTTGGAACCAGCCAATCCAATAAAGATCCAAAGCTAGAAGTGATTGGAAGAAAAATTGCAGACAAATGTGGTGGTTTGCCACTAGCTGCAGAAGCTCTTGGGGGTCTTCTTCGAACCAGATTATCTGAAAAAGATTGGAATAAGATTTTAAAAAGCAATATCTGGGATTTGCCTGACAACAAGGTACTTCCACCTTTACTATTGAGCTATCATTATTTGCCTGCTGCTTTGAAAGGATGCTTTGCCTACTGTTCAATTTTTCCAAAGCATTATACCATAGATAAAGAGACAGTAGTTAGACTATGGATAGCAGAAGGTCTAGTTCAGTCTAAAAGTAATCATAGTTTGGAAGAGACAGGAGATGAATACTTTGATGAACTGATATCTAGGTCATTGATTCAAAGAAACTCTAAATACAAGTTCATAATGCATGATCTCATCAATGATTTAGCTACATCTGTATCAGCTGGGTATTATTTTAGATATGAAGATCCAAAGCCAGGTGAATGTCTAGATAGAGTTCGCCATTTGTCTTACAGCAGGGAAGCATACGACTGTCTCAGTAAATTTGATGTAATTTCAGGAATAAAGGGTTTACGTACCTTCATTGCCTTGTCAATAAGGGTGAACTCATACCAGAATTATTTAGCTGAAAGTGTGCCACATGACTTACTGCCAAGGATGAGGTATCTACGGGTTCTATCTTTGTCACACTATGACAATATCACTAAGTTGCCTGATTCTCTTGGAAACCTCATTCATTTACGATACTTGGATCTCTCTTACACTAAAATCAAAAGGTTACCTGATGGGACATGTAAGCTGTACAATTTGCAGACCTTGCTGCTGTCACACTGTGAGTCTCTAATTGAATTGCCTCAAGACATAGACAAACTGATTAATCTGCGTCACATTGATCTTAGAGGAACTAAGCTGAAAGAGATGCCTACAAATTTGAGCAGGCTAAAAAATCTCAAAACTCTGACTTCTTTTGTTGTCAGCAAAAGGGAGGATGGGTTGAAGGTAAGAGAACTGGGAAATTTTCTACATCTACAAGGGAAAATCTCCATCTTAAACCTACAACATGTTGCTGATGCCATTGAAGCTTTTCAAGCCAATTTGAGAAACAAAGAACAAATTAGGGAGTTAGCATTGGAATGGGGCTGCTACACTAAAACTAAAAACCCACCTATTGAGAGAGAAGTACTTGACCAGCTGCAACCATCAGCAAGCCTGAAGAAACTCAGCATCAAATATTATGGTGGCACCAGCTTTCCAAATTGGTTGGGGTATTCTTCTTTCTGCAATATGGTATACCTTTGGATAAGTGATTGCAATCATTGTTTGTCACTGCCACCACTCGGGCAATTACCTGCTCTGAAACAACTCAGTGTTGCTAGGCTCAAATCGCTGAAATATATTGGATTTGAGTTCTATGGTAAAGGTTCCTCTTCATTTCAGCCATTTCCATCCCTGGGGTATCTAAGCTTTATAGGACTGTCACACTGGGAGGAGTGGCATTCCCTCGGAGATATAGCTACTGAATTTCCTTCCCTTCAGTATCTTGGCATATGCGATTGTCCCATGCTAAGAGGAAACTTACCCAACAATCTTCCTTCATTGTATACACTCACAATAGATGGATGTGATGTACTCGAGTTACAAAACTCAAATTCACTGAAAAGATCATCAGATCTCAAGTGGATCTCTTCTCTTCAATCTTTACATGTTATTCACTCCCCAGGTGTATTGTCATTACTAGAAACAGGGAAATTACCCTTGCTTGACTACTTTTATGTTGGATACTATGATTCTCTACAGCTATTCCCTGTGATGACAATGAGTAGCAATTGTCTTCGGACTCTGTACATCAGTAGCATTCCATCTCTCGTGTCCTTTCAACAAGAAGGTCTTCCCACATCATTGATGCACCTTCGTATCCAGAATTGTGAGAAATTAGAGTTTCTTCCTATTAAAGCAATGCACAATTATTCATTGCTCGTGCATCTGACATTAAGTGACAGCTGTCATTCACTGGAGTCCTTTCCTTTGGGCAGTTTCCCTGTTTTGGAGCGTCTGCATATCGAGATATGCCCGAATCTCATATCCTTCTTCATCTCAGATGATTCAGCTCAGAGCCTCTCACATCTCAAAGCCTTCCATATAACAAACTGTCCCAACTTGCAGTCCTTTCCACAAGGTGGGTTGCACACTCCCAACCTGGAGAAATTTTATGTTAAAAAATGTGAGAAACTCATGTCTCTTCCAGATTGTCTTAACACCCTCACTGGCCTACAAGAATTGAGTCTTCATGAGCTTCCGTTGCTTGATTCATTTGCGGAAGAGGGATTGCCTTTTAATTTGCGAAAACTTGAGGTTGTAGATTGTGGGAAACTCTCAACAACATCCATCATTCAGTGGCGTTCTCAATGGCTCTCTTCTCTTACAGAACTAACCATTGGAGGTGATGATCTTGTTGATGCCTTGATGAAGAAGCCACTACTTCCCACTTCTCTTGTGTCCCTATGCATTCGACATGTTTCTTTCTTGGAAGGGAAGGGGATTCAGCATCTCACTTCTCTGGAAAATCTGAAAATTATGAAATGTCCGAATCTTGAGTTGTTGCCAGAGAAGGAGTTGCTTCCAAGTTCTCTTTCAGTACTCAGTATCATAGACTGTCCTTTATTGCAAGAAACCTATCGAAGCAATGGAGGGATAAATTGGCCTCAGGTTGCGCATATTCCATGCATAAAGATCAATAAAGAAGTAATAATATGA 3855 0.401 MLYLPIHGEGKKRKKKKKLMALVGEALLSASVQVLVDRIASTDLKNFFCSKGHDLSILNKLKMTLLTLRAVLNDAGEKHITNPAVHEWLFDLKDALFDADNLLDEINTRALARKIEAESQSFSDKVWNFLSSPFKRLRGGMDYELEELLEKLEYFVKQKDILGLREGVSKSVWHGTAATSVVGQSTIYGRDDDMDKLKKYLLSDDGCDDHVGVITIVGMGGLGKTTLAQLLYNDKEVKGYFNLRAWAYITKEFDVFRVTKTLLESVSSKPVVTNNLDALQVELQQSLSGRKFLFVLDDLWDTYNDWNRLKAILKSGDVGSRVIVTTRQENVALAMNTFPIYYLRPLSHQHCWDLLAENAFGTSQSNKDPKLEVIGRKIADKCGGLPLAAEALGGLLRTRLSEKDWNKILKSNIWDLPDNKVLPPLLLSYHYLPAALKGCFAYCSIFPKHYTIDKETVVRLWIAEGLVQSKSNHSLEETGDEYFDELISRSLIQRNSKYKFIMHDLINDLATSVSAGYYFRYEDPKPGECLDRVRHLSYSREAYDCLSKFDVISGIKGLRTFIALSIRVNSYQNYLAESVPHDLLPRMRYLRVLSLSHYDNITKLPDSLGNLIHLRYLDLSYTKIKRLPDGTCKLYNLQTLLLSHCESLIELPQDIDKLINLRHIDLRGTKLKEMPTNLSRLKNLKTLTSFVVSKREDGLKVRELGNFLHLQGKISILNLQHVADAIEAFQANLRNKEQIRELALEWGCYTKTKNPPIEREVLDQLQPSASLKKLSIKYYGGTSFPNWLGYSSFCNMVYLWISDCNHCLSLPPLGQLPALKQLSVARLKSLKYIGFEFYGKGSSSFQPFPSLGYLSFIGLSHWEEWHSLGDIATEFPSLQYLGICDCPMLRGNLPNNLPSLYTLTIDGCDVLELQNSNSLKRSSDLKWISSLQSLHVIHSPGVLSLLETGKLPLLDYFYVGYYDSLQLFPVMTMSSNCLRTLYISSIPSLVSFQQEGLPTSLMHLRIQNCEKLEFLPIKAMHNYSLLVHLTLSDSCHSLESFPLGSFPVLERLHIEICPNLISFFISDDSAQSLSHLKAFHITNCPNLQSFPQGGLHTPNLEKFYVKKCEKLMSLPDCLNTLTGLQELSLHELPLLDSFAEEGLPFNLRKLEVVDCGKLSTTSIIQWRSQWLSSLTELTIGGDDLVDALMKKPLLPTSLVSLCIRHVSFLEGKGIQHLTSLENLKIMKCPNLELLPEKELLPSSLSVLSIIDCPLLQETYRSNGGINWPQVAHIPCIKINKEVII. 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10224 1284 FunFam Probable disease resistance protein At1g61300 172 338 - -
Seca3g10224 1284 Gene3D - 345 428 IPR042197 -
Seca3g10224 1284 SUPERFAMILY L domain-like 975 1268 - -
Seca3g10224 1284 Pfam NB-ARC domain 191 410 IPR002182 GO:0043531
Seca3g10224 1284 SUPERFAMILY L domain-like 502 936 - -
Seca3g10224 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 443 IPR027417 -
Seca3g10224 1284 PRINTS Disease resistance protein signature 286 300 - -
Seca3g10224 1284 PRINTS Disease resistance protein signature 213 228 - -
Seca3g10224 1284 PRINTS Disease resistance protein signature 632 648 - -
Seca3g10224 1284 PRINTS Disease resistance protein signature 382 396 - -
Seca3g10224 1284 Pfam Rx N-terminal domain 28 122 IPR041118 -
Seca3g10224 1284 SMART LRR_typ_2 658 681 IPR003591 -
Seca3g10224 1284 SMART LRR_typ_2 611 634 IPR003591 -
Seca3g10224 1284 Gene3D - 429 512 IPR036388 -
Seca3g10224 1284 Gene3D Ribonuclease Inhibitor 558 941 IPR032675 -
Seca3g10224 1284 Gene3D - 32 139 - -
Seca3g10224 1284 Gene3D - 170 338 IPR027417 -
Seca3g10224 1284 Gene3D Ribonuclease Inhibitor 947 1267 IPR032675 -
Seca3g10224 1284 PANTHER DISEASE RESISTANCE PROTEIN RP 58 883 IPR044974 GO:0006952
Seca3g10224 1284 FunFam Probable disease resistance protein At1g63360 429 512 - -
Seca3g10224 1284 Pfam Leucine rich repeat 589 645 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10224 Seca-Chr3 246908610 246914779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10224 601 695 WRKY Transcription Factor Family AT4G12020 40.625 1.23e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10224 - - aprc:113850186 1728.38