Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10145 ATGATTCAGGGAGCTGTAACACATGAAGATTTTGAAGGACATAAGGGAACAATAGAAGCTGGCGACTTTCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCAGAAATCCATGTGGCTCAAGGAACCCAAAGGGTCTGCAACTGTGGATCAACCTTGCTTCCAAATATAAAATAG 177 0.4407 MIQGAVTHEDFEGHKGTIEAGDFQWMTAGRGIVHSEIHVAQGTQRVCNCGSTLLPNIK. 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10145 58 PANTHER PIRIN-RELATED 1 47 IPR012093 -
Seca3g10145 58 Pfam Pirin 1 42 IPR003829 -
Seca3g10145 58 Gene3D Jelly Rolls 1 53 IPR014710 -
Seca3g10145 58 SUPERFAMILY RmlC-like cupins 1 43 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10145 Seca-Chr3 246016798 246017785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10145 1 52 Calmodulin-binding Proteins AT3G59220 58.182 9.80e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10145 K06911 - pcin:129318909 87.0409