Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10076 ATGGATGAGTCATGGGAAAATTTGCTTTCTGATATGGAAATGGATGATTGTCATTTATTCAATGAATACATGAACTCTTTTGAGGAAGAGTTAATCAACAATGGAGAGATTTCACTACAATCAGAACTATCATCTTTGGAAGGCGAATCTTCCAATTCAAATTTCACTACTCAAAACATTCATGTTGCTGTGGCAGCTGGCAATAACAGCACTATGAACATTGCTTCCTCGGAGTCTTTAGAGGAATCCACCGTTGTAGTGCCAAATAATATTCCCAAGGAAACACACAAAAAACATTATGATGATGAACAATCAAAGGAGGACCGAGAGGAACTACAAAATAGAAAATCCAAGAGGTGTAGAAGCTCTTCTCAGATACAAGATCACATTATCGCTGAGAGAAAGAGAAGAGAGAATCTCACCAAATTATTCATAGCACTTTCAGCGATGGATAAGGCTTCTATCATAAAAAACACTATCGAATATGTGAAATGCCTTCAGAAGAGTGTAAAAGATTTAGAGGAGCAGACCAAGAAAAGAAAAACAGAATCTGTGGCATGCTTCAAAAATGACAAAGCCGTTGCTGATGACTCTGAACCTACAAAGAGATTCCCCATTGTTGAAGCAAGAGTCTCAGCAAAAGATCTACTCATCAGAGTTATGTGTGAGAATCGAAAGGGCATTGTAATTAAACTATTGACCAAGCTTGAAGCTCATAATCTCTCTGTACTTTGTAGCAATGTTTTGCCATTTGGGAATTCTACTCTGAACATTGACATCATTGCTCAGGTGGACCACGAAGGATTCAACATGAAAATGGACGAACTAGTGGAAAATGTGATCAAGGATTTGTTGGGGTGTTGTAATGACTTGCAACAATAA 882 0.3776 MDESWENLLSDMEMDDCHLFNEYMNSFEEELINNGEISLQSELSSLEGESSNSNFTTQNIHVAVAAGNNSTMNIASSESLEESTVVVPNNIPKETHKKHYDDEQSKEDREELQNRKSKRCRSSSQIQDHIIAERKRRENLTKLFIALSAMDKASIIKNTIEYVKCLQKSVKDLEEQTKKRKTESVACFKNDKAVADDSEPTKRFPIVEARVSAKDLLIRVMCENRKGIVIKLLTKLEAHNLSVLCSNVLPFGNSTLNIDIIAQVDHEGFNMKMDELVENVIKDLLGCCNDLQQ. 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10076 293 SMART finulus 130 172 IPR011598 GO:0046983
Seca3g10076 293 Gene3D - 122 187 IPR036638 GO:0046983
Seca3g10076 293 Coils Coil 156 183 - -
Seca3g10076 293 MobiDBLite consensus disorder prediction 92 128 - -
Seca3g10076 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 179 IPR036638 GO:0046983
Seca3g10076 293 MobiDBLite consensus disorder prediction 76 128 - -
Seca3g10076 293 PANTHER BHLH TRANSCRIPTION FACTOR 18 282 - -
Seca3g10076 293 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10076 Seca-Chr3 244895802 244899787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10076 109 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 43.655 2.22e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10076 - - gmx:100815351 234.572