Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10063 ATGTCCTTCAATCAATCAAAGTCCGACAAGAACGACGCCGTTTACCGAAAATCCGGGCGATCCGCGAGCTTCAATCAGCAGAGAGGATCCTCAGGCGCCTACGGCAAGGGTGGTGGCGGTGGCGGCGGTGGAGGACCCGCGCCGTCGAGCACCTCGGCTTCATCACTCTCCTCTAGCCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGGGTAAACCCTTCCCCAGCGAACTCGACAGAGTCTAATAGTGCTTCTGCTGCTCGGACTATACATAATGGTACCCATGTACAGCCACAATTACATGGAGCATCTGATGGGCCAGCTACAAAGTCATATGAATTATCTGCTGCACAGAGGAGCACTAGAGTTGTTCCAAAGGCTCCGGCTTCTGAACCGCCCCCCATGAATTCTGATACAGCCGCTCCTGAAAGCCCTGCTAAGGGAGATGCATCAAAGGCATTCCCTTTTCAATTTGGATCAATTATTCCTAGCTATATGAATGGAATGGCAATTCCTGCTCGTACAAGCTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGTTCGTCACGACTCGTATAAATCTGCTGCATCTTCAGTGCCAATACCTCCTGTTCCAAAGCAGCAGCAACCACCTAGGAAAGATGCAGGTGTCATTGAGCAATCTAATGCTGGGGAGACTCATACAGGGACTAAGGCTAAAAAGGATCCTCAGGTGACAGCTTTGACCCCAGCAAACCAGATGCAGAAGCCTTCTGTTCTTCCTGTAACTGGGATTTCAATGGCAACACCGTATCACCAGTCACATGCATCTTTACAGTTTGGTGGTCCTAATCCACAGATGCAATCTCAGGGTATGCCAACGACAACCCTCCAGATGCCTTTACCAATGTTGCCTATTGGAAATGCTGCACAAGTGCAACATCCGGTTTTTGTTCCAGGCCTTCAGCCTCATCCGATGCACCCTCAGGGGATCATACATCAAGGCCAAAATGTGGGTTTCACTCCTCAAATGGGTCATCAATTGTCCCATCAATTAGGCAACATGGGTATTGGCATCAGCCCCCAATATCCCCAGCAGCAAGGGGGGAAATTTGCTGGTCCTCGAAAAACTACTCCTGTGAAGATAACTCATCCTGACACACATGAAGAGCTGAGGCTTGATAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCCGTTAAATCTTTTGGGGCTTCACATCCTATGAGCTATTATCCATCCAGCTCATACAACACCACTTCTCTCTATTATCCACCTTCTAGCTCTCTTCCATTAACAAGTAGCCAGATAACTCCTAATTCTCAGCCACCATTATTCAATTATCCTGTGAACCGTGGTCCGCAAAATGTGAGTTTCATGAATTCATCATCGCATAGTTCCGTGCCTGTTAATAAAACTAGCCATCCTATTCCTGGCATGGTTGAACCACCTATTCCAGAATCTTCCCATGATGCACCTAATGCAGTGTCATCAGTTCCAACGAGGGTTGCTTCTGTGACTATTAAACCAAGTGGTGTGTCTGCTGTTGTGGACTCATCATTGGCCAATTCCAGTGTTTCTGGTGATCAAAATAGAGAACCTCCTAGTTCAGCAGCATCTTGTGACACTAGCTCCTCTGTGCCACAAAAAGGGTCTGAAACTTCTTTGGTGAAACAATCTGCTGCACCTGTTGTTGTAACTGCTGAGAAGCTTGCTGACACTTCCTTGGTGCTGCCTTCAGCAGCTGTGAGTGAGGATTCTGCCTCAGTTGTGGCTAATAATGAAGACAGAAGGAGGGAATCTCTTAGTAGGTCCAACTCTTTGAAGGATAACCAGAAGAAACTAGGGAAGAAAGGTCAATCATCACAATATCAGGTTTCTGTGCAATCTCCTACAGTGGCTAATATGCCTTCTCAAGCTGTTGACAGTGGTATATCTGATACTGGAGTTTCTGAACCTGTAGGAACTAAAACAAACCATTCTCCGGCAGTTACCACTGGAGATCTTCCTATATCTGACACACTATCTGGTAGCATTTCCAGTGCTGTTGAACTGGAGACAAGTGGGTCTGCAGAAGTATCTGCTTGTGTTTTGGCTGAAGGATATGGTGCTCAAGCTGCTGATAGTTTGAACCATCATAAGCATGATAAGATAGATGAATCATCTGAAGGTAAATTACTAAAGCATTATGATAAAAATTATGAACCATCTCTTGAAGGATACAAAAAAAATATTAAATGTGATGGAACAGAATTTAAACAAGCTGAAAAAGACATTGCAAATGTAAAAACTGAGGTATTAACCTTTAAAACAATACATCAAGGACAGGATCAATCTGCAAGTTGTATTGCAGAATGTGACAGGACAGGATATAATTTAGTTACGTCTACCTCTATTGCATTGGATTCTAGAGATGTCTCTTTTAGTAGAAATGATAGTTTAGTTACTAATGACTCTGTTTCTGGAAATTTTGGCACATCAGATCTGCACTCTACTGATCTTCCAGAAACAACTTCAAAGGATATCAATGATAGTTCAGAGAATGCTGGCAGTGACTCAATGTCTCTTTCAGTATCAAATACCAAGGATAGACCAATATTAGAACCAAATAAGGTGAAAACTACATCTAAAGGGAAAAAGAAAAGAAGAGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGTCCTGAAGAAAAGAAAGAAGCTGTCTTGATTTCAGAGAGCACAGAAAGTGCTTCTACTTCAGGAAGTTCAATGCTGTTGCCTGCAGATGCTTCTCAGTCAGATGCTATAGCAGGTGAGAAATGTGGACACAGTAAAGCTGAACCTGATGACTGGGAGGAGGATGCTGACATGTCTACTCCAAAACTGGAAGTTGATGATAAATCTCAACAGGTTAATGATGGAAGTGGAGGTACGGCCAAAAAATATTCTCGCGATTTCCTTTTAAAATTTGCCAAGCAATGTACTGACCTTCCTGAAGGTTTTAAGATCATGGAAGACATAGCTGAGATTTTTATGAGTGCTAACATTAGTAGTCCTCATGTTATGGAGCGTGATTCACATCCAAGTCCTGGAAGAATTGTAGATAGGCCAGGTGGGATGTCTCGAATGGAACGTCGTGGCAGTATTGTGGCTGATGAAGACAGATGGAATAAAGTTTCTAGTGCTTTTCATTCTGGACGAGGTTTGGATGGTATTGGGGGTAATGTGGGATTTCGAACTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCTCGTGCACAGACACCTGTGCAATATGCTGGGGGGATCCTTTCTGGGCCAATGCAATCTGTGGGAAATCAAGGTGGGATGCAACGAAACAGCCCTGATGGGGAGAGGTGGCAGCGTGCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACTCCTCAGACTCCCATGCAGATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAGTGACAGATGTGGAAGAGGCAAAGCAGCGGCAGTTGAAAGGTATCTTGAACAAGTTAACTCCTCAGAATTTTGATAGACTCTTTGAACAGGTAAAAGCAGTTAATATTGACAGTGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTCGAGAAGGCTCTGATGGAGCCTACCTTTTGTGAAATGTATGCCAACTTCTGTTCACATCTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAGAAGATAACCTTTAAAAGGTTATTATTAAATAAGTGTCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAAGCAAATAAGGTTGATGAGGGTGAGGTCAGGCAGTCTAAAGAAGAAAGGGAGGAGAGAAGAGTCAAGGCGAGAAGGCGCATGTTGGGAAACATCCGATTGATCGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTTGGTCAATATGAGGATCCTGATGAGGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATCGGGGACATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCTTATTTTGAAAGAATGAAATTATTATCAAACAACATGAATTTATCTTCTCGGGTGAGGTTTATGTTGAAGGATGTCATTGACTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTACACAGAGATGCTGCACAAGAGAGGCAGGCTCAAGCTGGTAGGATGGGTCGTGGTCTAGGCAACAATCAGTCAACCAGAAGGAACCCTGTGGATTTTGGTCCAAGGGGATCATCTATGTTGTCTTCTCCTAATTCTCAGATGGGTGGACTGCGTGGGCTGTCTACTCATGTTCGTGGATATGGTTCTCAGGATGCTCGTTTTGAGGAAAGACAATCTTATGAGGCTAGGACCTTGTCAGTTACCTTGCCTCAAAGACCCTTAGGTGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCCATTAGAGGATCAACTGCAATTTCTAATTTGCCAGTATCTGATGTGCATCCTGGCCCTGGAGACTCTCATAGAATGACAACTGGTCTTAATGGTTATAACAATTTATCAGAGCGTACACCATATAATTCAAGGGAGGATCTTGCATCAAGGTATATTACAGATAGGTTTTCAGGTCCAGCTGCTTATGATCAATCTAGTGCTCCTGATCGTAATATAAAATATGGTAACAGAGACTTGAGGAATGCTCCAGGTCTTGACAGACCTGTTGCAACTTCACCTCCTGCACAATTGCAAGGGTCAACAGTCTCCCAGAATGCTTCATCAGAGAAGGTTTGGACAGAAGAACGACTGCGGGACATGTCCATGTCAGCAATCAAAGAATACTACAGTGCTAGAGATGAGAATGAAATTGCTCTATGCATCAAAGATTTGAACTATCCAAGTTTTCATCCTTCCATGGTTTCTCTCTGGGTCACGGACTCATTTGAGAGAAAGGACATAGAAAGAGATCTTTTGGCCAAACTGCTTGTCAAGCTTGTGAAATCTCAGGATGGCACCTTGAGTCAAGCTCAACTCATCAAAGGGTTTGAAGCGGTTCTCAGTACATTGGAGGATGCTGTTAATGATGCCCCCAGAGCACCAGAGTTTCTTGGCCGTATTTTTGCAAAAGCTATAACAGAGAATGTAGTCACTCTGAATGAGATTGGGCAGTTAATACATGATGGTGGGGAGGAGCCAGGCAGTCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTAGAGGTAATAAAAACTGAGAATGGGGACGTAGTTCTCAGTGAGATCCGTACAAGCTCTAACTTGCGGTTGGAGACTTTTCGGCCACCTAATCCTCTTACATCCAACAAGTTAGAGAAATTTATTTAG 5535 0.4381 MSFNQSKSDKNDAVYRKSGRSASFNQQRGSSGAYGKGGGGGGGGGPAPSSTSASSLSSSRSFNKKSNNAQGGQSRVNPSPANSTESNSASAARTIHNGTHVQPQLHGASDGPATKSYELSAAQRSTRVVPKAPASEPPPMNSDTAAPESPAKGDASKAFPFQFGSIIPSYMNGMAIPARTSSAPPNLDEQKRDQVRHDSYKSAASSVPIPPVPKQQQPPRKDAGVIEQSNAGETHTGTKAKKDPQVTALTPANQMQKPSVLPVTGISMATPYHQSHASLQFGGPNPQMQSQGMPTTTLQMPLPMLPIGNAAQVQHPVFVPGLQPHPMHPQGIIHQGQNVGFTPQMGHQLSHQLGNMGIGISPQYPQQQGGKFAGPRKTTPVKITHPDTHEELRLDRADAYSDGGSSGARSHPNIPSQSQPVKSFGASHPMSYYPSSSYNTTSLYYPPSSSLPLTSSQITPNSQPPLFNYPVNRGPQNVSFMNSSSHSSVPVNKTSHPIPGMVEPPIPESSHDAPNAVSSVPTRVASVTIKPSGVSAVVDSSLANSSVSGDQNREPPSSAASCDTSSSVPQKGSETSLVKQSAAPVVVTAEKLADTSLVLPSAAVSEDSASVVANNEDRRRESLSRSNSLKDNQKKLGKKGQSSQYQVSVQSPTVANMPSQAVDSGISDTGVSEPVGTKTNHSPAVTTGDLPISDTLSGSISSAVELETSGSAEVSACVLAEGYGAQAADSLNHHKHDKIDESSEGKLLKHYDKNYEPSLEGYKKNIKCDGTEFKQAEKDIANVKTEVLTFKTIHQGQDQSASCIAECDRTGYNLVTSTSIALDSRDVSFSRNDSLVTNDSVSGNFGTSDLHSTDLPETTSKDINDSSENAGSDSMSLSVSNTKDRPILEPNKVKTTSKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKEAVLISESTESASTSGSSMLLPADASQSDAIAGEKCGHSKAEPDDWEEDADMSTPKLEVDDKSQQVNDGSGGTAKKYSRDFLLKFAKQCTDLPEGFKIMEDIAEIFMSANISSPHVMERDSHPSPGRIVDRPGGMSRMERRGSIVADEDRWNKVSSAFHSGRGLDGIGGNVGFRTGQGGNFGVLRNPRAQTPVQYAGGILSGPMQSVGNQGGMQRNSPDGERWQRAASFQQRGLIPSPTPQTPMQMMHKAEKKYEVGKVTDVEEAKQRQLKGILNKLTPQNFDRLFEQVKAVNIDSAVTLTGVISQIFEKALMEPTFCEMYANFCSHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKVDEGEVRQSKEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEDPDEEDIEALCKLMSTIGDMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRMGRGLGNNQSTRRNPVDFGPRGSSMLSSPNSQMGGLRGLSTHVRGYGSQDARFEERQSYEARTLSVTLPQRPLGDDSITLGPQGGLARGMSIRGSTAISNLPVSDVHPGPGDSHRMTTGLNGYNNLSERTPYNSREDLASRYITDRFSGPAAYDQSSAPDRNIKYGNRDLRNAPGLDRPVATSPPAQLQGSTVSQNASSEKVWTEERLRDMSMSAIKEYYSARDENEIALCIKDLNYPSFHPSMVSLWVTDSFERKDIERDLLAKLLVKLVKSQDGTLSQAQLIKGFEAVLSTLEDAVNDAPRAPEFLGRIFAKAITENVVTLNEIGQLIHDGGEEPGSLLEVGLAADVLGSTLEVIKTENGDVVLSEIRTSSNLRLETFRPPNPLTSNKLEKFI. 1845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1424 1484 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1548 1581 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 965 993 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 47 104 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 177 259 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1 157 - -
Seca3g10063 1844 FunFam Eukaryotic translation initiation factor 4G 1197 1432 - -
Seca3g10063 1844 Gene3D - 1197 1432 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 936 954 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1633 1650 - -
Seca3g10063 1844 FunFam Eukaryotic translation initiation factor 4G 1650 1843 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1598 1650 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 366 425 - -
Seca3g10063 1844 Gene3D - 1648 1844 - -
Seca3g10063 1844 SMART if4_15 1197 1419 IPR003890 GO:0003723|GO:0005515
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1451 1484 - -
Seca3g10063 1844 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 357 1844 IPR045208 GO:0003743
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1424 1443 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 838 912 - -
Seca3g10063 1844 Coils Coil 1279 1299 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 406 425 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 229 259 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1289 1310 - -
Seca3g10063 1844 SUPERFAMILY ARM repeat 1193 1421 IPR016024 -
Seca3g10063 1844 Pfam MIF4G domain 1197 1419 IPR003890 GO:0003723|GO:0005515
Seca3g10063 1844 Pfam MA3 domain 1659 1769 IPR003891 -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1045 1065 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 276 296 - -
Seca3g10063 1844 SMART ma3_7 1657 1771 IPR003891 -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 603 693 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 638 693 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 18 32 - -
Seca3g10063 1844 SUPERFAMILY ARM repeat 1652 1839 IPR016024 -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 544 581 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 931 1003 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 612 637 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 838 885 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 1566 1581 - -
Seca3g10063 1844 MobiDBLite consensus disorder prediction 382 398 - -
Seca3g10063 1844 ProSiteProfiles MI domain profile. 1656 1780 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10063 Seca-Chr3 244524251 244533594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g10063 1 1843 Eukaryotic Initiation Factors Gene Family AT3G60240 43.829 0.0 1165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10063 K03260 - gmx:100796636 2317.35