Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10021 ATGGCCGATGCTGGATCTGAAGTTGAAGTGGAAATGGAAGAAAAATCATGGCATCTTTTGGCAACTTTGCTTCGAATCGGCCACCCTGTATACCCTGAACACCTCGCTTCGCGATGTCAATTGTTCACCGCATCACCAGAATTCGTTCTCTACGTTACCTCTCTCCCTGCTTCTCCTCTCTCCGTTACGGATAACGGACTCGTTACTCCCTCCGCCACGGCCGTTTTCGCTCTGGCTAGGTTTTTCTCCCTCCGATTCCCCGATTCACAACCGTGCCGGCTCAGGAAACGGAAGTTGCTTTTCTCATCCGCCGATGATGGAAGAGATCAGAAGAGATTGACAATTAGTAAGGAAGTTCAGGAAATCTCCTTGAAGAGTTTTGGTGATGCTTCCAAGGCTATGATGAGAAGGAATTTCCCTGAAATAAAATTTGAATCGCTGGTTATGCACGGTGGGAATGCTATAATCCCATTGCGTATTGATACACTTGGAGATGGAGAGTGTTCAAGTTGTCCAGCGCCAAAATTTGGACATAGGGAAGTTGATAATAATGCCATCACAAGCATGTCTCGAGGAGGGATTTCTGGATCTGTGATTAAAGCTAGTGATAGTTTGCTCATGACTGGAAGTGACTTAACTTTTCGGAAGCTAGTAGGTATAGATAGATTCATGGAATGTAATCTCTTTGTAAACCGTTCTCTGTCAACTAGTTTTCAAGATCCCTCGCTACATAATGAGGGTGTTGTTGGTGGCAATATCATTGAGTTTGGGAAGAAAATGGATTACTTTGATACATTTAGGCATGAATATCCTGGACAGAACATTGTTCATCCTGGTAGTGGTATTTGTGAAAGTAATACTTGCAAAGATCCAGTAAGAGAATCTGATGAAAATGAAGAAGTGGAAAGTGGTTCAAAGAAAGGGTTCATTGGTTTTGGAACGGATAAAGAGAAGGAAGATGCTGCTCAGATGGTCAAACCTGAACTATGTGTTGAAGAACTGACTAAAGATTTGGAACCAGAAAACTGCATCCATGTGTTGAATTTGGACAAAAATGAGACACTGAGAAATATCGGGACTCAGTCTTCCAATAAAATAGCTCTGTCCTCTTCAAATCCAAAGCAGCTGCTGAAATCATCCTCCATAGTGAAGGGAGGACAGAAGAACGATATACACTTAAAGACACAAATTCTCACGGAATCACTAGCCTGTAATAAGTTTGAAAATGCTGATCACTGTAAAAATGATCAGAAATTTATTACGAAACACAAACTAAAGCAAAGTCGTAAAGAAAACATGGCAGAGACAGAAAGTATCTCCATGACCCAGAAGGTGGAGAAAAAAGTATATCCATCTTTTCAATCTTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACCGTTTACCGCGCTCGAAGAACTGCAGATGGAAAAAGACTTGCAATAAAATGTCCTCATAATAATGCTCATAAAAATCATGTAAATAATGAGCGGAATATGCTTGAGCGTTTTGGGGGTAAAAATTTCATAATAAAGTTTGAAGGTTCTTTCAAAAGTGACAGTAGTACTAGTGACTGCTTTGTTTTAGAACATGTTGAGCATGACAGACCTGAGGTTTTGAAAAAGGAAATTGATATAATTCAGCTTCAGTGGTATGGGTATTGCATGTTCAGGGCCCTTGCGTGCTTGCACAAAGAGGTAATTTTTCTACTTTGCATATTCAGAGTCTCATGTGACTTTTACTTGAAGATAACATATGCAATCGTTCAAAAAATTCAAATTCTATTGATGTAG 1800 0.4022 MADAGSEVEVEMEEKSWHLLATLLRIGHPVYPEHLASRCQLFTASPEFVLYVTSLPASPLSVTDNGLVTPSATAVFALARFFSLRFPDSQPCRLRKRKLLFSSADDGRDQKRLTISKEVQEISLKSFGDASKAMMRRNFPEIKFESLVMHGGNAIIPLRIDTLGDGECSSCPAPKFGHREVDNNAITSMSRGGISGSVIKASDSLLMTGSDLTFRKLVGIDRFMECNLFVNRSLSTSFQDPSLHNEGVVGGNIIEFGKKMDYFDTFRHEYPGQNIVHPGSGICESNTCKDPVRESDENEEVESGSKKGFIGFGTDKEKEDAAQMVKPELCVEELTKDLEPENCIHVLNLDKNETLRNIGTQSSNKIALSSSNPKQLLKSSSIVKGGQKNDIHLKTQILTESLACNKFENADHCKNDQKFITKHKLKQSRKENMAETESISMTQKVEKKVYPSFQSFTIEEEEGSGGYGTVYRARRTADGKRLAIKCPHNNAHKNHVNNERNMLERFGGKNFIIKFEGSFKSDSSTSDCFVLEHVEHDRPEVLKKEIDIIQLQWYGYCMFRALACLHKEVIFLLCIFRVSCDFYLKITYAIVQKIQILLM. 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10021 599 SUPERFAMILY Protein kinase-like (PK-like) 450 567 IPR011009 -
Seca3g10021 599 ProSiteProfiles Protein kinase domain profile. 456 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g10021 599 Gene3D Transferase(Phosphotransferase) domain 1 534 570 - -
Seca3g10021 599 Gene3D Phosphorylase Kinase; domain 1 457 533 - -
Seca3g10021 599 SMART serkin_6 456 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g10021 599 Pfam Protein kinase domain 458 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10021 Seca-Chr3 243896174 243903150 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Seca3g10021 Pkinase 1.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10021 K02214 - gmx:100795742 658.677