Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g10010 ATGACTGCAAATGAGGTGCACCTTTATCATTTCAGTTCACTACACGTGGCCTTTAAATTCTATAGTAAGTATGTAGAGAAAAAGGGATTTCCAACGAGGAAATGGAATACCGTGGTGAACAAGAAAGGTGACGTGACTCAACAAACCTTTGTTTGTTTTAAGGAGGGATATCGTCTCAAGAAACATTTGATAAGAAAAGACCGAAAGAGAGAGGCTAGAGCAATGACACGTTGTGGTTGTAATGCTTTCTTCCGTGTGCGTAAGGATGTAGGCACAGGTCGTTGGCATGTAAAAGCCTTTGTGGATGATCATATCCACGAACTGTTGGTAGAGAAATTTGTTGGGATGTTACCTATCCATAGAAAGATGCACGAATGTGACATCAATCAAATGAATAGCATGAGAGATGCAGGTATTGGTGTGTCACAGATAGGGGTGGGAATAGGCCAGCCGACCTGTCAGGGGCCTACGGCCTGGCCTGTTTATGGCCTGGCCTGGCCTGGCTCATTTATTAAAAAGGCCAGGCCAAGGCTTGTTAAAAGGCCTATTTAG 552 0.4402 MTANEVHLYHFSSLHVAFKFYSKYVEKKGFPTRKWNTVVNKKGDVTQQTFVCFKEGYRLKKHLIRKDRKREARAMTRCGCNAFFRVRKDVGTGRWHVKAFVDDHIHELLVEKFVGMLPIHRKMHECDINQMNSMRDAGIGVSQIGVGIGQPTCQGPTAWPVYGLAWPGSFIKKARPRLVKRPI. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g10010 183 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 140 - -
Seca3g10010 183 Pfam FAR1 DNA-binding domain 19 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g10010 Seca-Chr3 243710307 243710858 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g10010 FAR1 5.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g10010 - - adu:110280242 139.043