Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09996 ATGGCCAAGCACAATTTTCTTCTCAATTTCTTTTTACCTTTCATTCTTTTATCTAATCCTTTAGTGTGTGATGCTAGTGAAAGTGCGAACAGTAAACTTCACATCATATACATGGGCGCACTTCCTAGGGGAGAATATTCCCCAACCTCTCACCATCTAAGTCTGTTGCAACAAGTTATTGACAACGGTGACATAGCAAGCCACTTTGTTCGAAGTTACAAGAGGAGCTTTAATGGTTTTGTTGCTAAACTCAACGATCAACAGAGAGAAAAGCTTGCCAACATGGAAGGTGTTGTCTCTGTTTTCCCTAGCAAAACACTTCACCTTCAAACCACAAGGTCATGGGATTTTGTGGGGTTATGTGAATCAATTAAAAGACAACAAAAAGGTGAGAGTGATGTTTTGATTAGAGTCATAGACACTGGGATTTGGCCAGAATCTGAAAGTTTCAGTGATGCAGGTTTTGGGCCTATTCCAACGAAGTGGAGGGGCATTTGTGAAGGTGGTGGTAACATCACTTGCAACAGGAAAATCATTGGGGCGCGAAACTATGATAGCAGGCATGTTGGAGATGGCACTGCGAGAGACCGTGAAGGTCATGGAACTCACACTGCCTCAACAGCTGCTGGAAATGAGGTTAAAGGTGTGAGCTTTTATGGGCTTGCAGAGGGTACTGCAAGAGGGGGTGTCCCATCTTCGAGGATTGCTGCATACAAAGTTTGTCAACCAGATTCAGGGTGTAGCGGTGCTGATGTGTTATCTGCTTTTGATGATGCCATTGCAGATGGAGTTGACATCATCACCATCTCACTTGGGAGCGGATCAGCGAGTGACTTCGTGAGAGATTCTATTGCTATTGGTTCTTTTCATGCTATGGAGAAAGGGGTACTCACTGTGCACTCTGCAGGTAATAAAGGTCCTGATCCCAGTTCTGTTTCTAGTGTAGCACCTTGGTTACTATCTGTTGCAGCAACTACCATTGATCGCCAATTCATTGATAAGGTGACTCTTGGTAATGGAAAAACCTTGTGGGGAAGGTCAGTGAATACTATTGTGTCAAATGGCACAAAAGTACCTATAGTTGTGCGTAATTCTGATGATAAAAAACGTTGTACAGGGGTGACTCCAGAAAACTGTGATTGTGTAGATAGCGAATTGGTGAAGGGGAAAATTGTTTTATGTGAAGGATTTAGTGGAACAGATGTGGTTTATCAAGCAGGTGCATTTGGTTTAATCATAAACAATAAAGACAACCTCGATGATGTGTCTTTTGTGACTTATTTACCTTCATTGAGCCTAGATTCCAAAGACTTTGATCTTGTTAAGTCCTACACAAATTCAACTAAATATCCACAAGCTGAAATACTCGAGAGTGAGATCTTTGAAGATCACAACGCTCCCAAAGTTGCTAGTTTCTCTTCTAGAGGGCCAAATCCCTTAGTTTCAGAGATTTTGAAACCAGATATAAGTGCCCCAGGGGTGGATATCTTAGCTGCATTTTCACCTGAAGCGTCACCCTCAGAGTCCTCAAATGATAAGAGAATGATGAAATACAACATACTCTCTGGAACCTCCATGTCTTGCCCCCATGTTGCTGGAATATCTGCATATGTAAAATCATTTCACCCTGATTGGTCACCAGCAGCCATTAAATCAGCTATTATGACCACAGCTCAGCCCCTGAATGGAACATATGATATGGCTGGTGAGTTTGCTTATGGAGCTGGGAATGTCAATCCACAACAAGTTATTGACCCTGGACTTGTTTATGACATTTCTAAGGAAGATTATGTACAAATGCTTTGCAACTATGGTTATGATGCTGAAAAAATTAAACAGATTGCTAGAGGAAATTCAACTTGCCATGGAGCTTCTCAAAGATCATTGGTAAAAGATATCAACTATCCTGCATTGGTGATTCCAGTTGAGCCCCTTAAGCCTTTCATTGTTAAGGTTAATAGAACTGTGACAAATGTTGGGTTTCCTAGCTCATGCTACAAGGCTACTATCTTCCCAAATTCAAAACTCAACTTCACAGTGGAGCCTGAGCTTTTGTCCTTCAAATCATTGAATGAGAAACAATCTTTTGTTGTCACTGTTGTTGGAGGAGCAAAACCCAAAGAAACTGTGTTTTCCTCGTCACTTATATGGTCAGATGGCACCCATAGTGTTAGGAGTCCAATTATTGTGTTGTGA 2196 0.4153 MAKHNFLLNFFLPFILLSNPLVCDASESANSKLHIIYMGALPRGEYSPTSHHLSLLQQVIDNGDIASHFVRSYKRSFNGFVAKLNDQQREKLANMEGVVSVFPSKTLHLQTTRSWDFVGLCESIKRQQKGESDVLIRVIDTGIWPESESFSDAGFGPIPTKWRGICEGGGNITCNRKIIGARNYDSRHVGDGTARDREGHGTHTASTAAGNEVKGVSFYGLAEGTARGGVPSSRIAAYKVCQPDSGCSGADVLSAFDDAIADGVDIITISLGSGSASDFVRDSIAIGSFHAMEKGVLTVHSAGNKGPDPSSVSSVAPWLLSVAATTIDRQFIDKVTLGNGKTLWGRSVNTIVSNGTKVPIVVRNSDDKKRCTGVTPENCDCVDSELVKGKIVLCEGFSGTDVVYQAGAFGLIINNKDNLDDVSFVTYLPSLSLDSKDFDLVKSYTNSTKYPQAEILESEIFEDHNAPKVASFSSRGPNPLVSEILKPDISAPGVDILAAFSPEASPSESSNDKRMMKYNILSGTSMSCPHVAGISAYVKSFHPDWSPAAIKSAIMTTAQPLNGTYDMAGEFAYGAGNVNPQQVIDPGLVYDISKEDYVQMLCNYGYDAEKIKQIARGNSTCHGASQRSLVKDINYPALVIPVEPLKPFIVKVNRTVTNVGFPSSCYKATIFPNSKLNFTVEPELLSFKSLNEKQSFVVTVVGGAKPKETVFSSSLIWSDGTHSVRSPIIVL. 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09996 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 64 730 IPR045051 -
Seca3g09996 731 Gene3D - 601 731 - -
Seca3g09996 731 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Seca3g09996 731 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Seca3g09996 731 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Seca3g09996 731 CDD Peptidases_S8_3 107 558 IPR034197 -
Seca3g09996 731 SUPERFAMILY Subtilisin-like 119 584 IPR036852 GO:0004252|GO:0006508
Seca3g09996 731 CDD PA_subtilisin_like 335 455 - -
Seca3g09996 731 Gene3D Peptidase S8/S53 domain 133 597 IPR036852 GO:0004252|GO:0006508
Seca3g09996 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 110 IPR037045 -
Seca3g09996 731 FunFam Subtilisin-like protease SBT1.5 133 340 - -
Seca3g09996 731 ProSiteProfiles Serine proteases, subtilase domain profile. 114 584 - -
Seca3g09996 731 MobiDBLite consensus disorder prediction 188 202 - -
Seca3g09996 731 MobiDBLite consensus disorder prediction 188 207 - -
Seca3g09996 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Seca3g09996 731 Pfam Subtilase family 132 576 IPR000209 GO:0006508|GO:0008236
Seca3g09996 731 Gene3D - 328 462 - -
Seca3g09996 731 Pfam Fibronectin type-III domain 632 730 IPR041469 -
Seca3g09996 731 Pfam Peptidase inhibitor I9 35 109 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09996 Seca-Chr3 243428909 243431798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09996 38 729 Subtilisin-like Serine Gene Family AT5G59190 56.385 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09996 - - psat:127076787 879.011