Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g09929 | ATGGCTTCTGCGGTCTTATACTTGCATGAAGGGTGGGAAGCCAAAATAGTGCATAGGGACATTAAGGCTAGCAATGTGTTGTTGGATAAGGATATGAATGAAAGGCTTGGAGATTTTGGGTTAGACAGAATGCACAGCCATTGTCAAATTTCTAGCACCGCAAAATTGGTTGGATCGGAACAGTTGGGTACATGGCTCCTGAAGTGA | 207 | 0.4396 | MASAVLYLHEGWEAKIVHRDIKASNVLLDKDMNERLGDFGLDRMHSHCQISSTAKLVGSEQLGTWLLK. | 69 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g09929 | 68 | ProSiteProfiles | Protein kinase domain profile. | 1 | 68 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g09929 | 68 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 16 | 28 | IPR008271 | GO:0004672|GO:0006468 | |
Seca3g09929 | 68 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 63 | - | - | |
Seca3g09929 | 68 | PANTHER | - | 1 | 58 | - | - | |
Seca3g09929 | 68 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 55 | IPR011009 | - | |
Seca3g09929 | 68 | Pfam | Protein kinase domain | 2 | 49 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g09929 | Seca-Chr3 | 242384331 | 242384537 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g09929 | 1 | 59 | Receptor kinase-like Gene Family | AT4G04960 | 64.407 | 1.02e-22 | 87.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Seca3g09929 | Pkinase | 3.4e-10 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g09929 | - | - | gmx:100794861 | 103.605 |