Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09852 ATGTTTGACAACATACCCACCAACCAACACATGATGACCATGCCTCTCTTTCTGATCTTCATCCTCCTACACATAACCTTGGTGGCATCATCGGATCTCCGACCTGGGTTTTACTCAAATACATGTCCACAAGCTGAACTCATAGTCCGAGATGTCATGAAGAAGGCCCTCATAAGGGAACCCAGAAGTGTTGCCTCTGTTATGCGCTTTCAGTTCCATGATTGCTTTGTTAATGGGTGTGATGCTTCTATGTTGCTTGATGATACACCAACCATGCTTGGGGAAAAACTGGCCCTTTCAAATATAAATTCTCTTAGATCATTTGAAGTTATTGATGAAATCAAGGAAGCCCTCGAGAAGGCGTGCCCCGGAGTTGTTTCTTGTGCTGACATCATAATTATGGCAGCTAGAGATGCTGTAGCACTGGTTCGTACAGGAGGACCCAACTGGGAGGTGAGATTGGGAAGATTGGACAGCTTGACTGCTAATCAAGAAGACTCAAACAATATCATGCCCAGTCCAAGAGCCAATGCAAGCTATCTTATTGACCTCTTCCAGAAATTTAACCTTAGTGTCAAAGACCTTGTAGCACTCTCAGGATCTCACTCTATTGGCCAAGCTCGTTGTTTTTCCATCATGTTTAGGCTATACAATCAATCTGGAACTGGAAAGCCTGACCCTGCCTTTGAACCTAAGTATAGAGAAGAGCTTAACAAGCTATGTCCACTAGATGTTGACCAAAATGTGACAGGGAACCTTGATTCCACACCTCTGCTGTTTGATAACCAATATTTCAAAGACTTGGTTGCTGGGAGGGGATTTCTCAACTCTGATCAAACACTTTTCACTTTCCCCCAGACAAGGGGTTTAGTGAGGATATACAGTAAACATCAAACTAAGTTTTTCAAAGCATTTGCAGAAGGGATGTTGAAAATGGGTGACTTGCAATCTGGTCGGCCTGGGGAGGTTAGGAGGAACTGCAGGATGGTCAATGCTCGCGGAGCTCATTTGATGTCTGAGTCTCAACACAAGATGGAGGGTAACGGTATATCAATATAA 1059 0.4381 MFDNIPTNQHMMTMPLFLIFILLHITLVASSDLRPGFYSNTCPQAELIVRDVMKKALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVIDEIKEALEKACPGVVSCADIIIMAARDAVALVRTGGPNWEVRLGRLDSLTANQEDSNNIMPSPRANASYLIDLFQKFNLSVKDLVALSGSHSIGQARCFSIMFRLYNQSGTGKPDPAFEPKYREELNKLCPLDVDQNVTGNLDSTPLLFDNQYFKDLVAGRGFLNSDQTLFTFPQTRGLVRIYSKHQTKFFKAFAEGMLKMGDLQSGRPGEVRRNCRMVNARGAHLMSESQHKMEGNGISI. 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09852 352 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 Pfam Peroxidase 49 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 CDD secretory_peroxidase 33 330 IPR033905 GO:0004601|GO:0042744
Seca3g09852 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Seca3g09852 352 FunFam Peroxidase 172 312 - -
Seca3g09852 352 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 Gene3D Peroxidase, domain 2 172 312 - -
Seca3g09852 352 Gene3D - 36 331 - -
Seca3g09852 352 PANTHER PEROXIDASE 72-RELATED 27 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 ProSiteProfiles Plant heme peroxidase family profile. 32 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 SUPERFAMILY Heme-dependent peroxidases 33 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca3g09852 352 FunFam Peroxidase 36 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09852 Seca-Chr3 241247679 241250747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09852 11 333 Peroxidase AT2G22420 73.684 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09852 K00430 - gmx:100796737 565.459