Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09835 ATGGATATTGGGTTAGAAAATATCTCTGGTGAGCATGTAGAACATCCTAATTCAGAGGATCATGTAGAAGAATTAATTTCAGAGGATCAAGAACAAGAAAATATGCCAGAGGCAAAGGTTCGCAGGATAATAGATTTGTCTAGTAAAGACATAAAGGGTTTGGAGTTTGGAAGTGAAGAAGATGCTTATAATTTCTATTTTTCATATGTTAGATGTCATGGCTTTGCTATGAGGAAAGATGATGTAATTCAGGATGTCAAAGGCAATGTTATTATGCGTCAGTATTTATGTAGCAAAGCTGGGTTGAGGGACAAAAAGCACTTTTTGAGGGTAGATCGTAAAAAAGATCATACGCCTTTAACTCGTGTTAACTGTGAAGCAAAGTTGCGAGTTAGGTATGATTATAAGACTGGGAAATTCAAGGTGGTTTCATTTATTGAGTGTCACGACCATGAGTTAACTCCGGCAAAATTTGTCCCTTTAATTCCTTCATATCGTGGCTTGTCTGAAGGTGATAAAGCTCAAGTGGATGCACTACATTCTCATGGTGTTAGGCCATGTCAAATAATGGGTTACTTATTGGGTCAAAAGGGAGGTTATGCCAATGTAGGATTTTGTAAAAAGGATTTATACAACTACATAGATGAGGTAAAGCGTGGTAAGATTAAAGATGGTGATGCAATGGCTGCATTAAGTTATTTGCAAGGAAAAGCAAACAATGAACCAATTTTTTTCTCTAGGTTTCTATGTTCTGATGATGGTAAATTGACCCACCTATTTTGGGCCGATGGAATTAGTCGTGCTGATTGTGAGAGCCGGAGGCTGATGAGGGCGGGGAGTGATCGCCGATGCAAAGAGGCACGGACAAGGAGCGGCTCCTGGCAGGCTTCTAAACACACATGGATGAACCTAACCCACACCCGAATGAGAGGGATCCAGAGGCTGTGCAGGTATGGGACTGTACAGTTGAGGATAGCTTAA 981 0.4047 MDIGLENISGEHVEHPNSEDHVEELISEDQEQENMPEAKVRRIIDLSSKDIKGLEFGSEEDAYNFYFSYVRCHGFAMRKDDVIQDVKGNVIMRQYLCSKAGLRDKKHFLRVDRKKDHTPLTRVNCEAKLRVRYDYKTGKFKVVSFIECHDHELTPAKFVPLIPSYRGLSEGDKAQVDALHSHGVRPCQIMGYLLGQKGGYANVGFCKKDLYNYIDEVKRGKIKDGDAMAALSYLQGKANNEPIFFSRFLCSDDGKLTHLFWADGISRADCESRRLMRAGSDRRCKEARTRSGSWQASKHTWMNLTHTRMRGIQRLCRYGTVQLRIA. 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09835 326 MobiDBLite consensus disorder prediction 1 21 - -
Seca3g09835 326 MobiDBLite consensus disorder prediction 7 21 - -
Seca3g09835 326 Pfam FAR1 DNA-binding domain 64 154 IPR004330 -
Seca3g09835 326 PANTHER OS01G0519700 PROTEIN 50 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09835 Seca-Chr3 241069880 241070860 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g09835 FAR1 8.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09835 - - ccaj:109794460 307.76