Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09826 ATGGCCTCTTCAATTTTCCTTCATTCTTATTCTCTGCTTCTTCTAATTCTCCCCTTGCTCCCATCTGTGTTTAGTTCAAACTGTGATGTACAGTTAAATTCCTCCCTACCCACCAATAGCCAATCTTCATGGAATTCACCATCTGGGGAATTTGCCTTTGGTTTCAAAAGTGCTATATTCAATGACACACAAACCATGTCCGTGCTTTCCATTTGGTTTGCCAAAGATCCCAACCATACAATAGTATGGTATGCAAAAGCAGAACAAAATCCAGCATTTCCTACAGGGTCCACAGTGAATTTAACAAGCAAAGGAATTGCCATATATGATCCAAAGGGCCATGAGATGTGGCACCGTCCAGAAAAGAATTATGCTGATGCCATAGTGTCTTGTGCTTCTATGCTAGATAATGGAAGTTTTGTTCTTCTAGATAAGGATGGTAAACAGGTTTGGGAGAGTTTTGATGAACCCACTGATACTATTTTGCCTGGCCAGAATCTGGCTAAGCCAAAGATTTTCAGAGCTCGTCAATCAGATACAAGTTTTTATGATGGGAATTTCATGCTGGCATGGCAGAATGATAGCAATTTGGTTCTTTACTATTCACCACCAGATTCTGAAACACATGCACCACATTCTAAAACACAAGAACCTTACTGGGCTACTGGAACTTCCAAAACTGAATCAGAGCTGATATTTGATGAGTCTGGACGCATGTACATCCAAAATAAGACAGGTGTAGCAATCAGTGAAGTCACAAAAGGTTTCCCAAAAGACTCATGGTACATTGCTAGGATTGATTCTGATGGAGTTTTCAGACTTTATTATCACCCCAAAACTGAGACCAATGTTGCTGACAGCTGCTCAGGTTCAGGCTGGTGGAATATACTGCAACATTATCCACAAGATATTTGCCTTTCTTTCATTGAGGAAACTGGGAATGTTGTTTGTGGTTTTAATAGCTACTGTGTTACCATCAATGGGAAGACTAACTGTGAATGCCCTGATCATTACTCTCCTTTTACACACAACAATCTCACAGGTTGTAGACCAGATTTTCCACTGCCTAGCTGCCACAAAGAAGGGTGGGAGCAGGATAAGGATCTAGTAGATTTCAAGGAGTATAAATATTTGGACTGGCCTCTCTCTGATTATGATCTGCTTATTGGTGATGCAATGGACAAGGATATGTGTAAACAAAAATGCCTTGAAGATTGCTTCTGTTCTGTAGCCATATATAATGATGAGGGAAGATGTTGGAAAAAGAAATATCCTTTGAGTAATGGAAGGAAACACCCTAGTGTCAATAGAATAGCACTTGTCAAGGTACCTAAAACAAGTTTGACCAAGCCTGACAAAGAACAGTCAAAACTGGTGCTTGTCATATCAATACTTCTTGGGAGCTCTGTGCTCCTCAATTTCATTCTATTCGTTGCTTTTTTTGTAGCCTTTTTCTTGTTCTACCACAGGAAGCTTTTGAATCCAGCTGCAGCAACAACAACAAGGTGTTTTACATACAAGGAGCTTGAAGAAGCAACTTCAGGCTTCAAACAAATATTGGGTAGAGGTGCTTTTGGGAAGGTATATAAAGGGGTATTAACATCAGATACCAGCAGATTTGTTGCTGTCAAAAAGCTTGATAAGGTTTTGCAAGAAGGTGAAAAGGAATTCAAAACAGAAGTGAGTGTAATTGGCCAGACCCACCACAGGAATTTGGTTCGTTTACTTGGTTACTGTGATGAAGGGGAGCATCGCCTTCTGGTCTATGAGTATATGAGTAATGGCTCACTTGCAAGTTTTCTCTTTGGGATTTCAAGGCCTCATTGGAATCAAAGAGTGCAAATTGCTTTAGGAATTGCAAGAGGTCTCACATATTTGCATGAAGAGTGCAGCACTCAGATCATTCATTGTGACATAAAGCCTCAGAACATACTCCTTGATGAGTTATTCACTCCAAGAATTTCTGACTTTGGGTTAGCAAAGCTATTGTTGGCTGAGCAAACTAGAGCTGCTAAGACAGGTGTTAGAGGGACAATTGGTTACTTTGCACCTGAATGGTTTAGGAAAGCTTCAATCACAACTAAAGTAGATGTTTACAGTTTTGGAGTGTTGCTGCTAGAGATCATATGCTGCAAATCAAGTGTTGCCTTTGCAATGGAAAATGAAGAAGAAGCACTCCTAGATTGGGCATATCATTGTTATAGCCAAGGAAAAGTAGCTAAATTGGTGGAAAATGATGAGGAGGCAAAGAATGACATAAAGAGGGTAGAAAAACATGTGATGGTAGCAATTTGGTGCATTCAAGAGGATCCTTCACTAAGACCTTCCATGAAGAAGGTCACTCAAATGCTTGAGGAAGTTACTGCAGTTTCTGTGCCTCCTCGCCCTTCCATGTTCAGTGTACAAGTTGAAACTTCATTTACTAACTACTGA 2433 0.402 MASSIFLHSYSLLLLILPLLPSVFSSNCDVQLNSSLPTNSQSSWNSPSGEFAFGFKSAIFNDTQTMSVLSIWFAKDPNHTIVWYAKAEQNPAFPTGSTVNLTSKGIAIYDPKGHEMWHRPEKNYADAIVSCASMLDNGSFVLLDKDGKQVWESFDEPTDTILPGQNLAKPKIFRARQSDTSFYDGNFMLAWQNDSNLVLYYSPPDSETHAPHSKTQEPYWATGTSKTESELIFDESGRMYIQNKTGVAISEVTKGFPKDSWYIARIDSDGVFRLYYHPKTETNVADSCSGSGWWNILQHYPQDICLSFIEETGNVVCGFNSYCVTINGKTNCECPDHYSPFTHNNLTGCRPDFPLPSCHKEGWEQDKDLVDFKEYKYLDWPLSDYDLLIGDAMDKDMCKQKCLEDCFCSVAIYNDEGRCWKKKYPLSNGRKHPSVNRIALVKVPKTSLTKPDKEQSKLVLVISILLGSSVLLNFILFVAFFVAFFLFYHRKLLNPAAATTTRCFTYKELEEATSGFKQILGRGAFGKVYKGVLTSDTSRFVAVKKLDKVLQEGEKEFKTEVSVIGQTHHRNLVRLLGYCDEGEHRLLVYEYMSNGSLASFLFGISRPHWNQRVQIALGIARGLTYLHEECSTQIIHCDIKPQNILLDELFTPRISDFGLAKLLLAEQTRAAKTGVRGTIGYFAPEWFRKASITTKVDVYSFGVLLLEIICCKSSVAFAMENEEEALLDWAYHCYSQGKVAKLVENDEEAKNDIKRVEKHVMVAIWCIQEDPSLRPSMKKVTQMLEEVTAVSVPPRPSMFSVQVETSFTNY. 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09826 810 Gene3D - 157 290 IPR036426 -
Seca3g09826 810 ProSiteProfiles Bulb-type lectin domain profile. 29 155 IPR001480 -
Seca3g09826 810 ProSitePatterns Protein kinases ATP-binding region signature. 520 545 IPR017441 GO:0005524
Seca3g09826 810 SUPERFAMILY Protein kinase-like (PK-like) 496 785 IPR011009 -
Seca3g09826 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 792 - -
Seca3g09826 810 CDD STKc_IRAK 520 786 - -
Seca3g09826 810 Gene3D Transferase(Phosphotransferase) domain 1 592 792 - -
Seca3g09826 810 PIRSF SRK 1 809 IPR024171 GO:0004674
Seca3g09826 810 Gene3D - 24 155 IPR036426 -
Seca3g09826 810 SMART serkin_6 514 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g09826 810 CDD PAN_AP_plant 364 444 - -
Seca3g09826 810 Gene3D Phosphorylase Kinase; domain 1 490 591 - -
Seca3g09826 810 SMART blect_4 35 157 IPR001480 -
Seca3g09826 810 Coils Coil 739 759 - -
Seca3g09826 810 Pfam Protein kinase domain 517 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g09826 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 178 295 IPR036426 -
Seca3g09826 810 ProSiteProfiles Protein kinase domain profile. 514 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g09826 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 224 IPR036426 -
Seca3g09826 810 Pfam D-mannose binding lectin 80 173 IPR001480 -
Seca3g09826 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Seca3g09826 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 795 - -
Seca3g09826 810 FunFam S-receptor-like serine/threonine-protein kinase 489 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09826 Seca-Chr3 240912190 240920550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09826 504 785 Receptor kinase-like Gene Family AT1G60800 45.517 5.46e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca3g09826 Pkinase 4.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09826 - - gmx:100796323 1303.12