Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09823 ATGGACGCCACCCACACCATGTTTTGTAACAATGATTTGGTTAACCCTCTAAGCTCAATGGGCATGCAAGTGTCCTGCATTCTTGTTGTCTCACATTTCTTCAATGTTGTGCTTAGAACTGTGGGTCAACCTGGACCCATTGCACAAATTCTGGCTGGGTTGGTGCTAGGTCCAATGTCTCACATTGAGTATATAAAAAAGTTATTCTTTCCTGCAAGTTCCATAAATTACTATGAAGTTGTGAGCTTCTTCTGTCGCATACATTTCATGTTCTTATTTGGGCTAGAGATGAATATTCACTATACCATGCTCAATCTACGTTTGGTGAGCTTGGTAGCATGTGGTGGTGCACTAATGGGTGGTCTTTTTGGTCTCTCTGTCTCTTTTTATTTGTATCAAGAGTTAGATAGCAATGCCCCCATTTATTATTTTTGCATGATCATTATGTTAGTGGTATCATACACAAGCTCCCCTATGGTGATTCGTTTGGCAGCTGAATTGAGGTTTGCTGCATCAGATGTTGGGAGAATTGCAGTGTCTTCTGCATTGATTACAGAAATGGGTTGCTTGTTGTTCTTTAATGTGATGGTTAACTGGAAAAGAGAAAACCACATTTCTACTGGTATAGGTTGCACTGTAGTCACTGCCCTTGTCATTGTTATAAATAGGTACTTAGCTGTTTGGTTAAATGCAAGACATAGGAACCAGAAGTACCTCAAGGCTCCTGAGCTCTTATTCATCCTCTTTTTGCTTGTAACTAGCTCAATGATTATAGAAATTTGGGGTTACAACAGTGTTATTAGTTGTTTTATCATTGGCTTGTTGTTTCCTAAGGAAGGCAAAACAGCTAGAACATTGCTACATAAACTTGGTTATTCTATTTACAACTTTGTTCTTCCAGTATATTTTGGGTACTTGGGTTTGCAATGTGACATAATAACTGTCTTCAAGAGCTTGTCTCAGACAACAAATACAGCAATATTGATTTTGTTGAGCATTGGTGGCAAGCTTGGTGGTACTCTTATAGTTTGTCGTTACCTTCAAATTCCTACTAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACAAGAGGTTATGCTGATCTGTTATTCATTGGTGCAGCAGCAAAGCAAGTAATTACTTTTAATACAGAAGCTTACAATGTGTTACTAGTGTCAATAGTATTCAACACAATCATATCAGGAATAATTGTGGCTTTTCTAGCAAGAGGGGAAGAGAAAATGTTTGCAAATAACCATACTGCAATTGAACCTCAGCAATTGGAGGATGAGCTTAGAATTCTTGCTTGTGTATATGATCCTCGTCAAGTATCTGCCATACTTTCCACAATACTAGCAATACATGGCTCTAGACAAGCACCATCTACTATTTATTTAATGCACCTAATAGAGCTTGTGAAGAAAATCAAGTCTAACTTGTTATACCATGAAAAAGAAAATACAGACCTTAGTGATGATGAGGACTATGGTGGCAATGATGTTGTGGAAATTAATAATGCTTTAGATGCCTTCACTGCAGACACAAAGATTTTGGTCCACCAAAGAAGGGCAGTTTCTTCTTTCTCTAGTTTGTATGAAGATGTTTGCAATGAAGCAGAAGATCTTCAAGTGTCCATTATTCTACTTCCCTTTCACAAGCATCAGAGGATTGATGGAAAATTGGAAAGTGGGAAAGAAGGTATAAGGATTACTAATCAAAAGGTTCTTAGACATGCCCCTTGTTCTGTTGGTGTCATTGTAGAAAGAGGACTTTCTAAGGTCCCTGGTTTTGCACAACTAGTTGGATCTGAAGCCATACAAAATGTTGCAACACTTTTCTTTGGAGGACCAGATGATCGTGAAGCTATTGCTTGGAGCCTACGCATGTCCACAAGCCCTCGAATTAACTTGACAATCATCAGATTTCTGTTGTCTTCTTCATCACAGAATGAACACATTGAAAGTGGACAATCTGAGGAGAAAGAGATTTTAATGTCATTGTCTGGGGAAGAGACTGTGAATGAGATTGACAATACCTTTATGGTTGATTTCTATAATAGGTATGTGACTTCTGGTCAAATTGGATATGTGGAAAAGTTTGTGAAGGATGGAGCACAAACAGTGGAATCTTTGAAAGAGATAGGGGATATGTACTCTTTGTTTATAGTAGGAAAGGGTGGTAGAGGAAACAGTTCATTAACAATAGGTATGAGTGACTGGGAGGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCCTCTTCAGACTTTGATATTCATGGCTCAGTTTTGGTTATTCAACAGCATAGAGATGCCAAGAAAGGACTAATGCATGATTAG 2343 0.3841 MDATHTMFCNNDLVNPLSSMGMQVSCILVVSHFFNVVLRTVGQPGPIAQILAGLVLGPMSHIEYIKKLFFPASSINYYEVVSFFCRIHFMFLFGLEMNIHYTMLNLRLVSLVACGGALMGGLFGLSVSFYLYQELDSNAPIYYFCMIIMLVVSYTSSPMVIRLAAELRFAASDVGRIAVSSALITEMGCLLFFNVMVNWKRENHISTGIGCTVVTALVIVINRYLAVWLNARHRNQKYLKAPELLFILFLLVTSSMIIEIWGYNSVISCFIIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDIITVFKSLSQTTNTAILILLSIGGKLGGTLIVCRYLQIPTSEGIFLGFILNTRGYADLLFIGAAAKQVITFNTEAYNVLLVSIVFNTIISGIIVAFLARGEEKMFANNHTAIEPQQLEDELRILACVYDPRQVSAILSTILAIHGSRQAPSTIYLMHLIELVKKIKSNLLYHEKENTDLSDDEDYGGNDVVEINNALDAFTADTKILVHQRRAVSSFSSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGVIVERGLSKVPGFAQLVGSEAIQNVATLFFGGPDDREAIAWSLRMSTSPRINLTIIRFLLSSSSQNEHIESGQSEEKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKDGAQTVESLKEIGDMYSLFIVGKGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGLMHD. 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09823 780 Gene3D - 19 417 IPR038770 -
Seca3g09823 780 FunFam Cation/H(+) antiporter 1 19 418 - -
Seca3g09823 780 PANTHER CATION/H + ANTIPORTER 10 771 - -
Seca3g09823 780 Pfam Sodium/hydrogen exchanger family 27 409 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09823 Seca-Chr3 240887868 240890781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09823 11 780 Antiporter Super Family AT1G79400 39.744 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09823 K26731 - gmx:100804522 1384.78