Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09812 ATGGAGCTCGGGTTGAGCTTAGGAGATGCTATTTCAAGAAGGCCAGCTTTCAAGTCCAACTCAATACAAGATTCTTCTTCCAACCAATTGGGTTTAGCCTTCAACACCACCTTATCCATTGCTCCAGCCAAACAAAGACACAAACAGAAATACAAGATTAATAGTGATGATGAGTATGTCGACATAACCACCGCTGAAGAAGCTACAAATGAATCCTTGACGAGTCTTCCTCCTCCTCACCTCTCCTTCCCATGCCACCCTTTGCAAAATGGTGGTAGTTGTTCAAGGGCGGGGTTGGAGGTGAATTCTAACATGGAGGAATTGTCATCATCAATATCGTTTCAAATGGATCTCTGCATCTTCAGATCAGCTGGTGATCATCATCAAATTCAAAGAGATCAGAACAGTACAGCTGGCACCACCAGAAATAAGAAGCTTAGGCTCTCCAAGGAACAATCTGCTTTCCTTGAACAAACCTTCAAACACCACACTACTCTTAACACAGTCAGTATACTATTCATAGATACTTAG 531 0.4256 MELGLSLGDAISRRPAFKSNSIQDSSSNQLGLAFNTTLSIAPAKQRHKQKYKINSDDEYVDITTAEEATNESLTSLPPPHLSFPCHPLQNGGSCSRAGLEVNSNMEELSSSISFQMDLCIFRSAGDHHQIQRDQNSTAGTTRNKKLRLSKEQSAFLEQTFKHHTTLNTVSILFIDT. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09812 176 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 43 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09812 Seca-Chr3 240767361 240768863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09812 123 167 Homeobox Transcription Factor Family AT5G47370 51.852 3.26e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09812 K09338 - gmx:100805312 103.99