Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09782 ATGCTTCCTAACTCTAAAGACAGATCATATCAGTCAGCGCAAAAGGCAGCCTCTCAACTCTCAAGTCTCAAGTACACCATGATAGAGATCATAGAAACACTGTTGCTGCTCCTCTCACCCTTCCTTCTATTTTACATCATCTTCTCCGCCAAACCCACCACCACCACTGTTCTCCACCTTCCACCAAGTCCACCATCCCTCCCTCTAATCGGCCACCTCCACCTCCTCACTCCATCCTTATACAAATCCTTCCAATCCCTCTCCTCAAATCACGGCCCTCTCCTCCACCTCCGACTCGGCCCCTCCCGCCGCCTCCTCCTCGTCTCCTCCGCCTCCGCCGCTGCTGACATCTTCAAGACTCACGACCTCGCGTTCTCTTCCCGACCGGCGTTCGCGTTCGCCGAGAGGCTCCCTTACGGGACCTCAGGGTTCATCACCGCCCCCTATGGCCCCTACTGGCGCTTCATGAAGAAGCTCTGCGTTACGGAGCTCCTCAGCCCGAGGCAGCTGGAGAGGTCAAAGAGCATAAGGAAGGAAGAGATAGAGCGATGTGTGAGAAAGGTATTGCAGAATGCTCGGAAGAATGGTGCACTTGATTTGGGTGCTCAACTCATGAAACTCACCAACAATGTCACTTGCAGAATGGCCATGAGCACCAGGTGTTCGGAGAAATGCGAGGATGCTGAGAGGATCAGGAAGTTGGTGAAGGAGTCCTTTGAGCTTGCTGCCAAATTGTGCTTTGGGGATGTGTTGGGCCCTCTCAAGGAGTTGACTTTCTGGGTTTATGGGAAAAAGGCTAGGGATGTGAGCAACAGGTATGATGAATTGTTGGAGAAGGTGCTGAAGGAGCATGAGGAGAAAAGGTTATCAGGTGGAAATGGGAATGGAGGTGATGAGAGTGAGAGGGATTTAATGGATATTCTGTTGGATGTTTATCATGATGCTTATGCAGAGTTCAAGATCACAAGGACACATATCAAAGCATTCTTTATGGACCTCTTCATTGCAGGCACAGACACCTCAGCAGAAGCTATGCAATGGGCAATGGCTGAGCTCCTCAACCATCCTGAAGCATTCCAGAAGGTGAGAAAGGAGATAGAGTTAGTCACTCAAAATGTTAGGCTAGTTGAAGAATCAGATGTCCAAAACCTGCCATATTTGCAAGCAGTTGTGAAGGAAACACTGAGACTTTACCCACCAGGACCAGTAACAACAAGAGAATGCCGCCAAGACTGCAAAATAAATGGCTTTGATGTACCAGCAAAAACAGCAGTAGCAATCAATTTATACGCCATAATGAGGGACCCACATTCTTGGGACAATCCAAATGAATTCCACCCTGAAAGGTTCTTGGTCTCCTTGAATCAACAAGATGATCCAATTCCAAGCAATGATCAGAATGGTGCTAAAAGAATGAACTTCAATTTTGTTCCATTTGGAGCAGGAAGAAGAGGGTGCCCAGGGACAACACTGGCATTCAACTTGATGAACACTGCAATTGCTGCTATGGTGCAGTGCTTTGATTGGAAAATTGGTGAAGATGGGAAAGGAGAAAAGGTTGATATGCAATCTGGATCTGGCATGTCTTTGAGCATGGTTCACCCACTTATTTGTCTTCCTGTAGTACATTTTAACCCATATGATGAATAA 1650 0.4776 MLPNSKDRSYQSAQKAASQLSSLKYTMIEIIETLLLLLSPFLLFYIIFSAKPTTTTVLHLPPSPPSLPLIGHLHLLTPSLYKSFQSLSSNHGPLLHLRLGPSRRLLLVSSASAAADIFKTHDLAFSSRPAFAFAERLPYGTSGFITAPYGPYWRFMKKLCVTELLSPRQLERSKSIRKEEIERCVRKVLQNARKNGALDLGAQLMKLTNNVTCRMAMSTRCSEKCEDAERIRKLVKESFELAAKLCFGDVLGPLKELTFWVYGKKARDVSNRYDELLEKVLKEHEEKRLSGGNGNGGDESERDLMDILLDVYHDAYAEFKITRTHIKAFFMDLFIAGTDTSAEAMQWAMAELLNHPEAFQKVRKEIELVTQNVRLVEESDVQNLPYLQAVVKETLRLYPPGPVTTRECRQDCKINGFDVPAKTAVAINLYAIMRDPHSWDNPNEFHPERFLVSLNQQDDPIPSNDQNGAKRMNFNFVPFGAGRRGCPGTTLAFNLMNTAIAAMVQCFDWKIGEDGKGEKVDMQSGSGMSLSMVHPLICLPVVHFNPYDE. 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09782 549 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Seca3g09782 549 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 Pfam Cytochrome P450 61 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 SUPERFAMILY Cytochrome P450 58 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 41 535 - -
Seca3g09782 549 FunFam Cytochrome P450 family protein 53 538 - -
Seca3g09782 549 Gene3D Cytochrome P450 46 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g09782 549 CDD CYP93 92 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09782 Seca-Chr3 240293352 240298217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09782 40 547 Cytochrome P450 AT2G42250 50.196 4.04e-167 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09782 K23814 - gmx:100790065 773.081