Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09776 ATGCAATACACACAGCTCTTTTGTTTCATTTTAATGTTGCTAGTCCTTGCTTTTGATGGTAGTGAATCCCAGCAGAATTGTGTCTACCCACTCAAGACCATTACCGTTAGTCAATCAGGCAATGCAGATTTCAAAACAATTCAAAGTGCCATTGACTCTGTCCCTAACAAAAACTCTCAATGGATTCACATCCAAATTTCACCTGGTGCTTACAGAGAGCAAATCAAAATTCCCATGAATAAATCATGCATTTATCTTGAAGGAGCTGGTAGAGACTCAACGAGTATTGAATGGGGTGATCATTTGAAGCCTACTTTTCTAATTACAAGAGCAGATAATATTGTTGCAAAGGGCATTACTTTCATGAATACACTTAACAACCCTGTACTATTAGAGGGCACTAGTAACATCACACAAGCCTTGGCTGCATGGATCCATGGAGATAAATGTGCTTTCTTTAATTGTGCTTTTCTAGGGGTGCAAGACACCCTACGTGATCATTATGGCCGCCATTACTATCATAATTGCTACATTCAAGGTGGAGTTGATTTCATTTATGGGAACGGTCAATCAATCTTTGAGGCAAGTACAATATATTTTTCAATGGGGAAATCTGGTCCCAAAAAGGATGGGGCTATTACAGCACAAGATAGGGATTCGCCAAATGAAAGCAGTGGGTTTGTGTTTAAAAATTGTATCATAAACGGGACAGGTGGAAAGGCAGAACTTGGAAGAGCATTGGGTGCTTATTCCAGAGTCATCATAGCCAATTCATTCCTAACAGATGTGGTTAAACCTGAGGGATGGAGTCCTTGGACATATGTTGGCCATGAAGCAAACATCACATATGTGGAAGAGGGATGCAGAGGAGCAGGAGCAAACAAATCAAAGCGTGTGAAATGGATGAAGAGTTTGAGTGGACCTGAGCTTCAAAAATTCTTGGACATCTCTTATATTGATAGTGAAGGGTGGATTGACAAACTGCCAACAAAAACATCATTTGAATGA 1008 0.3998 MQYTQLFCFILMLLVLAFDGSESQQNCVYPLKTITVSQSGNADFKTIQSAIDSVPNKNSQWIHIQISPGAYREQIKIPMNKSCIYLEGAGRDSTSIEWGDHLKPTFLITRADNIVAKGITFMNTLNNPVLLEGTSNITQALAAWIHGDKCAFFNCAFLGVQDTLRDHYGRHYYHNCYIQGGVDFIYGNGQSIFEASTIYFSMGKSGPKKDGAITAQDRDSPNESSGFVFKNCIINGTGGKAELGRALGAYSRVIIANSFLTDVVKPEGWSPWTYVGHEANITYVEEGCRGAGANKSKRVKWMKSLSGPELQKFLDISYIDSEGWIDKLPTKTSFE. 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09776 335 Pfam Pectinesterase 34 318 IPR000070 GO:0030599|GO:0042545
Seca3g09776 335 Gene3D - 30 333 IPR012334 -
Seca3g09776 335 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 17 326 - -
Seca3g09776 335 FunFam Pectinesterase 30 329 - -
Seca3g09776 335 SUPERFAMILY Pectin lyase-like 32 332 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09776 Seca-Chr3 240253373 240255122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09776 7 278 Carbohydrate Esterase AT2G19150 44.404 1.15e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09776 - - mtr:25501033 475.707