Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09751 ATGGTTGATCAGGTTCAGCGCCCTAGGACCATTGAGAATGTTGCAGCCCAGCTTCATCTCCGTACTGGTCCTTCTTTGTACCAAAGGCGCACATTTGGGAATTACTCAAATGCCGCATTCCAGTACCCAGTGATGCCAGCATGCAGAGCTACAACTGATTTGTCCACTGTTGCAACAACAGCCTCCCCCGTCTTTGTTGCAGCTCCTGCAGATAAAGGAAACTTTCTTATTGACTTTCTCATGGGTGGAGTTTCAGCTGCCGTGTCCAAAACTGCTGCTGCCCCCATTGAACGGGTTAAACTTTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGTAGACTTTCTGAGCCCTATAAGGGTATTGGTGATTGTTTTAAGCGAACAATGCAGGAGGAGGGTATGGTTTCCCTATGGAGAGGTAACACTGCTAATGTCATCCGTTATTTCCCCACTCAGGTTGCTTTGAACTTTGCATTTAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGATAGGGATGGTTACTGGAAATGGTTTGCGGGTAATTTGGCCTCTGGAGGTGCTGCTGGTGCCTCGTCTCTTTTCTTTGTCTACTCCCTTGACTATGCTCGTACCCGTCTGGCTAATGATTCAAAGGCTGCAAAGAAGGGTGGAGAAAGGCAATTCAATGGTCTTGTTGATGTCTACAGGAAGACATTGGCATCTGATGGAATTGCTGGTCTTTACCGTGGTTTCAACATTTCCTGTGTTGGAATCATTGTGTACCGTGGTCTCTACTTTGGAATGTATGATTCCCTGAAGCCAGTTCTCCTGACTGGATCTTTGCAGGATAGCTTTTTCGCTAGCTTTGCCCTTGGATGGCTCATCACCAATGGTGCAGGTCTAGCATCATACCCAATTGACACTGTTAGAAGAAGAATGATGATGACATCTGGGGAAGCTGTGAAGTACAAGAGCTCCATGGATGCATTTTCACAAATCCTCAAGAATGAGGGTGCCAAGTCCTTGTTTAAGGGAGCTGGTGCTAACATCCTCCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTACAGGTAATAGTGTTCGGAAAGAAGTATGGATCAGGTGGTGCTTAA 1131 0.4624 MVDQVQRPRTIENVAAQLHLRTGPSLYQRRTFGNYSNAAFQYPVMPACRATTDLSTVATTASPVFVAAPADKGNFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMQEEGMVSLWRGNTANVIRYFPTQVALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDSKAAKKGGERQFNGLVDVYRKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09751 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 179 271 IPR018108 -
Seca3g09751 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 279 365 IPR018108 -
Seca3g09751 376 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 64 375 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca3g09751 376 FunFam ADP,ATP carrier protein, mitochondrial 76 372 - -
Seca3g09751 376 Gene3D Mitochondrial carrier domain 76 372 IPR023395 -
Seca3g09751 376 PRINTS Mitochondrial carrier protein signature 194 212 IPR002067 GO:0055085
Seca3g09751 376 PRINTS Mitochondrial carrier protein signature 288 310 IPR002067 GO:0055085
Seca3g09751 376 PRINTS Mitochondrial carrier protein signature 244 262 IPR002067 GO:0055085
Seca3g09751 376 PRINTS Mitochondrial carrier protein signature 141 161 IPR002067 GO:0055085
Seca3g09751 376 PRINTS Mitochondrial carrier protein signature 78 91 IPR002067 GO:0055085
Seca3g09751 376 PRINTS Mitochondrial carrier protein signature 91 105 IPR002067 GO:0055085
Seca3g09751 376 PRINTS Adenine nucleotide translocator signature 75 87 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca3g09751 376 PRINTS Adenine nucleotide translocator signature 284 300 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca3g09751 376 PRINTS Adenine nucleotide translocator signature 153 165 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca3g09751 376 PRINTS Adenine nucleotide translocator signature 179 192 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca3g09751 376 PRINTS Adenine nucleotide translocator signature 119 140 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca3g09751 376 SUPERFAMILY Mitochondrial carrier 73 361 IPR023395 -
Seca3g09751 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 167 IPR018108 -
Seca3g09751 376 Pfam Mitochondrial carrier protein 178 274 IPR018108 -
Seca3g09751 376 Pfam Mitochondrial carrier protein 280 365 IPR018108 -
Seca3g09751 376 Pfam Mitochondrial carrier protein 74 171 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09751 Seca-Chr3 239851156 239854738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09751 1 376 Antiporters AT5G13490 79.898 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09751 K05863 - gmx:100819556 657.907