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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca3g09709
ATGGTGAAGTTCCTGAAGTCGAACAAGGCGGTGATCGTGCTGCAGGGGCGGTACGCTGGGAAGAAAGCGGTGATCGTAAGAACCTTCGACGAGGGAACACGCGAACGCCCCTATGGTCACTGCCTTGTGGCTGGGATCAAGAAGTACCCTAGCAAGGTCATCAAGAAGGACTCTGCCAAGAAGACCGCGAAGAAGTCACGCGTGAAGGCATTCGTGAAACTCGTTAACTACCAGCACCTCATGCCCACACGTTACACCCTCGACGTCGATCTCAAGGACGCCGTTACCCCCGACGTTCTCCACGCAAAGGATAAGAAGATCACCGCACTCAAGGAGACCAAGAAGCGCTTCGAGGAACGCTTCAAAACCGGCAAGAATCGGTGGTTCTTCACCAAGCTCAGGTTCTGA
408
0.5441
MVKFLKSNKAVIVLQGRYAGKKAVIVRTFDEGTRERPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVTPDVLHAKDKKITALKETKKRFEERFKTGKNRWFFTKLRF.
136
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca3g09709
135
ProSitePatterns
Ribosomal protein L27e signature.
124
135
IPR018262
GO:0003735|GO:0005840|GO:0006412
Seca3g09709
135
PANTHER
60S RIBOSOMAL PROTEIN L27
1
135
IPR001141
GO:0003735|GO:0005840|GO:0006412
Seca3g09709
135
FunFam
60S ribosomal protein L27
1
135
-
-
Seca3g09709
135
Coils
Coil
100
120
-
-
Seca3g09709
135
Pfam
Ribosomal L27e protein family
52
135
IPR001141
GO:0003735|GO:0005840|GO:0006412
Seca3g09709
135
Gene3D
-
1
135
IPR038655
-
Seca3g09709
135
CDD
KOW_RPL27
6
88
IPR041991
-
Seca3g09709
135
SUPERFAMILY
Translation proteins SH3-like domain
3
135
IPR008991
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca3g09709
Seca-Chr3
239295867
239296274
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca3g09709
1
135
Cytoplasmic Ribosomal Protein Gene Family
AT3G22230
81.481
2.55e-80
231
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca3g09709
K02901
-
gmx:100793982
245.743
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