Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09685 ATGGGTTTGGAGTTTGTAACTCAGCATGCTGCTTTCAAATTTTATGAGGAATATGCTAAAGCCCATGGTTTTGTAGTAAGAAAAGATGATATAAGGAAGGATTTTAGGGGTAACACTGTGATGCGACAATTTGTATGCAATAGACAAGGATTGAAAAATAAAAAGCATTTCATGAGATAA 180 0.3389 MGLEFVTQHAAFKFYEEYAKAHGFVVRKDDIRKDFRGNTVMRQFVCNRQGLKNKKHFMR. 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09685 59 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 56 - -
Seca3g09685 59 Pfam FAR1 DNA-binding domain 13 55 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09685 Seca-Chr3 239036251 239036430 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g09685 FAR1 6.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09685 - - ccaj:109792835 85.8853