Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09663 ATGGAAGAGAAAGAAGAAGCCAACCAAGATCATAATTACCACCCATCTCCCCACCCTTTTGATAACACCATAACCACTAAGGAAGAGTCTATAAGGAAACCAATTGTTGGAGGTCATGATAGGGTGAAGAGGGATGAGTGGAGTGAAGGAGCAGTGTCTACACTTCTTGAAGCCTATGAAACCAAATGGGTAATCAGAAACAGAGCCAAACTCAAAGGCCAAGACTGGGAAGAAGTTGCAAGACACGTGTCATCACGAGGGGACTGTACAAAGTCACCAAAGACATCAACACAGTGCAAGAACAAAATTGAGTCCATGAAGAAGAGGTACCGATCAGAATCAGCAACTGCAGATGTTTCTTCTTGGCCTCTATACTCACGTCTTGATCTTCTTCTGCGTGGAACTGGGCAAATCATGTCCACACAACAGACCACACTGCCACCGGCAACGGCGGTGGCGCCACCTTCTCAGTCACCGTTGGTGGTGTTGGAGCCATCAGTGGCAGCGGTTTCACATCCACCTCCAGCTGCTGATCCTCCACCAATTTCCAATGCACCAAATTCACATGGATCCAATGGTGTTGATAAGCTACCCAAGGAAGATGGGTTAGCAACAAAGTCATATGAGCATGTTTCTAATAAGAATGATCCATTGGACACGGATAGCAGCACGCCTGCGCTTTATAGCAAGAAGGAAAAGTTAATTAGATGTAACAAGAGGAAGACAAAAATTGAGAATAACAACAAGCGAAGAAGGAAAGAATATGTGGAAATTGCAGAGAGCTTAAGATGGCTAGCAGAAGCTGTGGTGAGGTCAGAACAAGCAAGAATGGAGACAATGAAAGAGATAGAGAAGATGAGACTTGAAGCTGAGGCCAAGAGAGGTGAAATGGATCTTAAGCGAACTGAAATAATTGCCAATACACAATTAGAGATTGCTAGGATCTTCGCAAGTGTCAACAAAGGTGTTGATTCATCTTTAAGAATTGGGAGAAGATGA 999 0.4424 MEEKEEANQDHNYHPSPHPFDNTITTKEESIRKPIVGGHDRVKRDEWSEGAVSTLLEAYETKWVIRNRAKLKGQDWEEVARHVSSRGDCTKSPKTSTQCKNKIESMKKRYRSESATADVSSWPLYSRLDLLLRGTGQIMSTQQTTLPPATAVAPPSQSPLVVLEPSVAAVSHPPPAADPPPISNAPNSHGSNGVDKLPKEDGLATKSYEHVSNKNDPLDTDSSTPALYSKKEKLIRCNKRKTKIENNNKRRRKEYVEIAESLRWLAEAVVRSEQARMETMKEIEKMRLEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGVDSSLRIGRR. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09663 332 MobiDBLite consensus disorder prediction 1 37 - -
Seca3g09663 332 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 26 318 IPR044823 -
Seca3g09663 332 MobiDBLite consensus disorder prediction 170 200 - -
Seca3g09663 332 FunFam Trihelix transcription factor ASIL2 47 112 - -
Seca3g09663 332 Pfam Myb/SANT-like DNA-binding domain 44 130 IPR044822 -
Seca3g09663 332 Gene3D - 47 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09663 Seca-Chr3 238676955 238681475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09663 33 184 Trihelix Transcription Factor Family AT3G14180 32.051 5.63e-18 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca3g09663 Myb_DNA-bind_4 6.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09663 - - gmx:100793978 417.542