Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09604 ATGGCCATTCAAAAACATAGAGGTTGTGCACAATTTCTTGGGAACTCTAAACCTTATGTTTCCATGATCCTTTTACAATTTGGCTATGCTGGCATGAACATTATCGCTAAGCTTTCCCTCAACCAAGGCATGAGCCACTATGTCCTCGTGGTTTATCGCCACGCCTTTGCAACTGCTGCCATAGCTCCATTTGCCTTTATTTTTGAAAGGAAACATCAACCAAAGATAACATTCCCAATTTTTGTCCAAATATTCATCTTAGCTCTCCTCGGGCCAGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGTAACATGCTTCCAGCCATGACTTTTGTTATGGCAATTTTTTTCCAGATGGAGAAGATAAACATAAAGAAGATGAGAAGCCAAGCAAAGATATTGGGAACATTAGTGACAGTGGTTGGGGCGATGCTAATGACTTTGTATAAAGGGCCTATTGTGGAGTTGGTATGGGCCAAACATACCCATCCTCACAATAAAAGCACCACTGGATCCTCAGTTGACAAAGATTGGTTAGTAGGCAGCATCTTCCTTATTGTTGCCACCTTTGCTTGGTCTTCCCTCTTTATTCTACAAGCCAAAGCTATAGAGACATACAAGAATCATCAGCTAAGCCTCACTTCACATGTTTGCTTCATAGGCACTCTTCAAGCTGTTTGTGTTACTTTTGCTGTGGAGCACAATTTTTCTGTATGGAGAATTGGTTGGGATATGAATTTACTTGCTGCTGCCTATGCAGGTATTGTGACCTCAAGCATATCATACTATGTACAAGGGCTGGTGATTAAGGAGAAAGGACCTGTCTTTGCAACTGCCTTTAGTCCTCTAATGATGATCATTGTTGCCATCATGGGTTCCTTTATCCTTGCAGAACAGATTTATCTTGGAGGTGTGATCGGTTCCATCTTGATAGCTATAGGCTTATACTCTGTCCTGTGGGGAAAGCACAAAGAACAAATACAGAATAAATTAGCAGATGGTATTTTGCCTGTGAAGTGTGATCAAATGGCTGGAATTACAGGGCCAGTGGTGATTGATGCCACAGATCAATTTGCTGAAGTAAAATGTTGTCAGAAAGGAGAAGCCAACAAAAGCTCTTTAGCTGTGATAAGCATGCCTATTAGAGAGTCTACAAAAGTTAACCAATAA 1206 0.4104 MAIQKHRGCAQFLGNSKPYVSMILLQFGYAGMNIIAKLSLNQGMSHYVLVVYRHAFATAAIAPFAFIFERKHQPKITFPIFVQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAIFFQMEKINIKKMRSQAKILGTLVTVVGAMLMTLYKGPIVELVWAKHTHPHNKSTTGSSVDKDWLVGSIFLIVATFAWSSLFILQAKAIETYKNHQLSLTSHVCFIGTLQAVCVTFAVEHNFSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKEKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGSILIAIGLYSVLWGKHKEQIQNKLADGILPVKCDQMAGITGPVVIDATDQFAEVKCCQKGEANKSSLAVISMPIRESTKVNQ. 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09604 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Seca3g09604 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
Seca3g09604 401 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0016020|GO:0022857
Seca3g09604 401 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Seca3g09604 401 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09604 Seca-Chr3 237454336 237461166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09604 1 396 Nodulin-like Gene Family AT5G07050 64.428 1.35e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09604 - - gmx:100804390 610.527