Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09600 ATGAATTCATTGCACTTAAAACATTGTGTACAAAGCTACAATGTCTTTGACTTTCTGAGGGACGTTGTCAGCAGGGTTCCTGACTACGGCCATGGCCATGGCCATGGACATACTGATACTGGTGCTGATGATCGGGCCATTTCAAGAAGAAGGTTTGAAGTCCGATTATCTTTGTTTTCTTTTGTTTTTGACCCTTCTGATATGCAGATAGTTATTCATGCACTTACCGATGCAACTTACTTTTCCAGGAAAGCAGCTGGTGATGATTGTAATGACAGTGATGAAGAAGCTAAGAGAAGCAAGATGCAAGAGTTGGGCCACACTGGCGGTACTGGTAGGGGAAGAGGCCGCGGTAGAGGAAGAGGACGTGGTCGAGGGTCTCGAGCTGTAGTAAGAGGGGCATATCATCAGGAAGCTGAACCTGAACCTTGTTTTACTGTTCAGCAGGGGAGCCAACATAATACGAATACAAGTGTGGCAATACATGATGGTGCAGAATCAAAGGAGTTACCAAAGGAGAATATTGCAGTTCCTGTTGAAAGCTCTGAGTCACTCGGTACTATTGATCTGAATGCCAATACAAACGAAAACGAGGACAAAAAAGCTAACACAGCAGCTAATCCTTCACTGTCTGAACCTCCAACAGAAAGCAAGCATGAAGAAATTCCGGGCTGGTCCCTTTCTGATGTGGACAAGATGGCCATTGACTCAATGCAGCTTGCACAACTTGGCAGGGGACTAGAAGAGGATGAGGAAGATTATGATGAGGAAGGGTAA 777 0.4517 MNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHGHTDTGADDRAISRRRFEVRLSLFSFVFDPSDMQIVIHALTDATYFSRKAAGDDCNDSDEEAKRSKMQELGHTGGTGRGRGRGRGRGRGRGSRAVVRGAYHQEAEPEPCFTVQQGSQHNTNTSVAIHDGAESKELPKENIAVPVESSESLGTIDLNANTNENEDKKANTAANPSLSEPPTESKHEEIPGWSLSDVDKMAIDSMQLAQLGRGLEEDEEDYDEEG. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09600 258 MobiDBLite consensus disorder prediction 180 213 - -
Seca3g09600 258 MobiDBLite consensus disorder prediction 87 103 - -
Seca3g09600 258 MobiDBLite consensus disorder prediction 177 228 - -
Seca3g09600 258 MobiDBLite consensus disorder prediction 86 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09600 Seca-Chr3 237426548 237431678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09600 1 247 CCAAT-HAP5 Transcription Factor Family AT3G12480 35.249 2.70e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09600 K21752 - gmx:100814712 271.552