Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09568 ATGTCCTTCATTCCCTTCATTCTCTCCCTCTTCCTCCTTCTACCCTTACTCCTAGCTCAACCTCATTCCCCTTCTCCACCTTCTTCCTCGGCAGCATGCAAGTCCACATTATACCCAAAACTCTGCCGTTCCATTCTTTCCTCCATACGCTCCTCACCATCCGACCCCTACCGCTTAGGCAAATTCTCCATCAAACAAAGCCTCAAACAAGCCAAGAAACTAGCCAAAGTCTTCAACGACTTCCTCAACAAGCATCGCTCTTCTTCCCTCAACCACGCAGAGGTTGCAGCGCTCGAAGACTGCGCTGAGTTGAACAACCTCAACGTGGATTACTTGGAGACAGTGTATAAGTTGGTGAAATCTGGAGATACAGCATCATTCAACAGTACAGATGAGTTGGTTGAAACTGTTGAGACGTATCTCAGTGCTGTTGCAACTAACCATTACACTTGTTATGATGGGTTGGTTGTGACGAATAGCAACATTGCTAAGGCACTTGCTGTGCCTCTTAGCAATGTGACGGAACTGTATAGTGTGTCACTTGGGTTGGTGACGCAGGCTCTCAAGAAGAATATGAAGAAGCATAAGACCCGTAAACATGGTCTTCCTACTAAGGCTTATAAAGTCAGGCAGCCACTTGAGAAGCTCATCAAGCTTCTTCACAAAAAGTATAGTTGCAATGAATCATCCAATTGTACTAGAAGCGAAAGGATTCTTAAAGAAAGCGAAAACAAAGGAATTCTATTGAATGATTTTGTGATTGTGAGCCTTGATGGCACTGGCAACTTCACTTCCATTGGAGATGCTGTTTCTGCTGCACCTAACAACACAAAGCCCCAAGATGGCTATTTTCTTATCTATGCCAGAGAAGGAAACTATGAGGAATATGTCATTATTCCCTCACAGAAAAAGAACATCTTGCTAATTGGGGATGGTATCAACAAAACTTGCATCACAGGAAATCACAGTGTAGTAGATGGTTGGACAACTTTCAATTCTTCAACCTTTGCTGTCACCGGAGAAAGATTCATTGCAGTGGATGTCACATTCAGAAACACAGCAGGACCTCAAAAGCACCAAGCAGTAGCTGTGAGGAACAATGCTGACCTGTCCACATTCTACCGTTGCAGTTTTGAAGGATACCAAGACACTCTCTATGTTCACTCTCTAAGGCAATTCTATAAGGAATGTGATATCTATGGCACTGTGGATTTCATTTTTGGCAATGCTGCTGTGGTCTTCCAAGACTGTAACATCTATGCCAGAAAACCAATGCCAAACCAGAAGAATGCTGTCACTGCACAAGGCAGAACTGATCCAAACCAGAACACTGGAATTTCAATACAAAATTGCAGGATTGATGCTGCACCTGACTTGGCTGAAGATTTGAATTCCACTTTAAATTACTTAGGAAGGCCATGGAAAGAGTATTCAAGGACTGTGTATATGCAATCATATATTGGTGATCTAATTTATCCTTCTGGGTGGTTAGAGTGGAATGGCACAACTGGGTTAGATACCCTCTTTTATGGTGAATTTGATAACCATGGACCTGGTGCTGATACCAACAATAGGGTACGTTGGCATGGTTACAATCTGTTGAATGCTACTCAAGCTTGGAACTTTACTGTCCTTAATTTTACCTTGGGGGATACATGGCTTCCAGACACAGATATACCCTACTCTGCAGGACTCTAG 1698 0.4311 MSFIPFILSLFLLLPLLLAQPHSPSPPSSSAACKSTLYPKLCRSILSSIRSSPSDPYRLGKFSIKQSLKQAKKLAKVFNDFLNKHRSSSLNHAEVAALEDCAELNNLNVDYLETVYKLVKSGDTASFNSTDELVETVETYLSAVATNHYTCYDGLVVTNSNIAKALAVPLSNVTELYSVSLGLVTQALKKNMKKHKTRKHGLPTKAYKVRQPLEKLIKLLHKKYSCNESSNCTRSERILKESENKGILLNDFVIVSLDGTGNFTSIGDAVSAAPNNTKPQDGYFLIYAREGNYEEYVIIPSQKKNILLIGDGINKTCITGNHSVVDGWTTFNSSTFAVTGERFIAVDVTFRNTAGPQKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYKECDIYGTVDFIFGNAAVVFQDCNIYARKPMPNQKNAVTAQGRTDPNQNTGISIQNCRIDAAPDLAEDLNSTLNYLGRPWKEYSRTVYMQSYIGDLIYPSGWLEWNGTTGLDTLFYGEFDNHGPGADTNNRVRWHGYNLLNATQAWNFTVLNFTLGDTWLPDTDIPYSAGL. 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09568 565 SMART PMEI_2 24 183 IPR006501 GO:0004857
Seca3g09568 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 187 IPR035513 -
Seca3g09568 565 Pfam Plant invertase/pectin methylesterase inhibitor 31 182 IPR006501 GO:0004857
Seca3g09568 565 SUPERFAMILY Pectin lyase-like 251 564 IPR011050 -
Seca3g09568 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
Seca3g09568 565 PANTHER PECTINESTERASE 14 555 - -
Seca3g09568 565 FunFam Pectinesterase 248 565 - -
Seca3g09568 565 NCBIfam pectinesterase inhibitor domain 6 186 IPR006501 GO:0004857
Seca3g09568 565 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Seca3g09568 565 Pfam Pectinesterase 253 550 IPR000070 GO:0030599|GO:0042545
Seca3g09568 565 Gene3D - 249 565 IPR012334 -
Seca3g09568 565 CDD PMEI-like_3 31 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09568 Seca-Chr3 236839728 236843604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09568 32 565 Carbohydrate Esterase AT3G10720 62.222 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09568 K01051 - gmx:100808277 889.026