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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca3g09559
ATGGCTGAAAGCATTCTGTTCAACATCATGGAGACATTGATCGAAAAGCTGAGTTCTATGGTTGTTGAAAGCTGGAACATGAGAGATGATCTTGAGAAGCTGGTGGACAACATGGCAGAGATCAAGGCTGTGATTTTGGATGCAGAGGAGCAGCAGGGTACCAACCATCAAGTTCAACTCTGGCTGGAGAAGCTGAAAGATACTCTTTATGATGCTGAGGACTTGCTTGATGACTTCTCCACTGAAGACAAGAGGCGACGAGTGATGACCAAAGACAAGCAGTTTAAAATGGTTCGCATCTTCTTCTCATCCTCCAACCAACTTGTCTTTTCTTTCAAAATGTCTCAAAAAATCAAGGAACTTAGGAAGAGAATTGAGGCTCTTAATGTTGATAATGATAAGGCAGTCCAACAACACTTCTTTGAGTTGAAAAAGTGGGTATGTGTGTCTGATGACTTTGATGTGAAAGCCATTGCTGGAGAGATCATTGGGTCTAGAAGTGATGATGTGATGGAGCAAGTGCAACAGGAACTCCGCAAAAGAGTTGAGGGAAAAAGATATTTACTAGTTTTGGATGACATATGGAATGAAAATCGTGCGCATTGGCTTAAATTGATGACACTGCTGGTGGATGGAGCAAAAGGAAGTAAAATAATCATAACCACAAGAAGTGAGAAGGTGGCCAAAATAAGTGGCACTTCTTCATTCTTCTTTTTAAAGGGTCTAGATGAGGAACAATCTTGGAAGTTGTTCAGTCAATTGGCTTTCGAGAATGGAAAAGAGCCCGAGAATCAAAATTTGGTGTCGATTGGCAAGGAAATTGTGAGGAAATGTTCAGGGGTTCCTCTCGCAATTAGAAGTATTGGAAGCTTAATGTATTCCATGGAGACAGAAAATGATTGGTTGAGCTTCAAGGATAAAGACCTTGCGAAAATCGATGAACAAGGTGAAAATGTTGTACTTCAACTTCTCAAAGTAAGTTATGATCATCTGCCCTTCCACTTGAAAAAGTGCTTTTCATTTTGTTCCTTGTTTCCAAAAGATTATCACATTTGGAGGAGAAACTTAATTCAACTTTGGGTGGCACAAGGGTTTATTCAGTCATCAGATGACAACATGTGTTTAGAAGAAGTTGGTAATGGATACTTCATGAATTTAGCTCATAGATGTTTCTTTCAAGATTTTCAAAGAAATCTTGATGATGAAGTTAATACTTTCAAAATGCACGATCTTGTGCATGACTTGGCAAAGTTCGTTTCAGGAAATGATTGTGCCATAGTCAATGAAAAAGAGCAACATATTGACAAACAAACCCGTCATCTTTCTTTTAGCTTTTCATTGGATTCTTTTTGGCAAGTTCTAGTTCCCTTTTCAAGGCATACAAACTAA
1389
0.3888
MAESILFNIMETLIEKLSSMVVESWNMRDDLEKLVDNMAEIKAVILDAEEQQGTNHQVQLWLEKLKDTLYDAEDLLDDFSTEDKRRRVMTKDKQFKMVRIFFSSSNQLVFSFKMSQKIKELRKRIEALNVDNDKAVQQHFFELKKWVCVSDDFDVKAIAGEIIGSRSDDVMEQVQQELRKRVEGKRYLLVLDDIWNENRAHWLKLMTLLVDGAKGSKIIITTRSEKVAKISGTSSFFFLKGLDEEQSWKLFSQLAFENGKEPENQNLVSIGKEIVRKCSGVPLAIRSIGSLMYSMETENDWLSFKDKDLAKIDEQGENVVLQLLKVSYDHLPFHLKKCFSFCSLFPKDYHIWRRNLIQLWVAQGFIQSSDDNMCLEEVGNGYFMNLAHRCFFQDFQRNLDDEVNTFKMHDLVHDLAKFVSGNDCAIVNEKEQHIDKQTRHLSFSFSLDSFWQVLVPFSRHTN.
463
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca3g09559
462
FunFam
Probable disease resistance protein At1g63360
328
418
-
-
Seca3g09559
462
Gene3D
-
334
417
IPR036388
-
Seca3g09559
462
SUPERFAMILY
P-loop containing nucleoside triphosphate hydrolases
136
342
IPR027417
-
Seca3g09559
462
Gene3D
-
125
235
IPR027417
-
Seca3g09559
462
Gene3D
-
9
119
-
-
Seca3g09559
462
Gene3D
-
241
332
IPR042197
-
Seca3g09559
462
Pfam
Rx N-terminal domain
10
94
IPR041118
-
Seca3g09559
462
PRINTS
Disease resistance protein signature
181
195
-
-
Seca3g09559
462
PRINTS
Disease resistance protein signature
278
292
-
-
Seca3g09559
462
PANTHER
DISEASE RESISTANCE PROTEIN RP
121
447
IPR044974
GO:0006952
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca3g09559
Seca-Chr3
236725257
236729742
Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca3g09559
178
439
WRKY Transcription Factor Family
AT5G45050
23.616
4.14e-06
47.8
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca3g09559
-
-
mtr:11419276
427.557
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