Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09554 ATGGCAGAGGTCATCAACATTCCCCCTGATTCTCTCGACAAATCCCCTTCCTCTTCCGCTCCTCCTCCTCCTCCTCCTCAGCCACAGCCTCCGTCCTCTTCCGCCGCCGAAACCGATCTCCCTCCACCTCCTCCGCCGCCGTCACGGCGGAGGGATGACAGGGATTTCGATCGCCCACCTAACCGCCGCGGCGATTACTACGACCGGAACATGTCGTCCCCGCCGCCGCCCAGAGACAGGGATAGGGACTTCAAGCGCCGCCGCAGCCCCAGCCCTTCCCACCGCGACCGCCGCTATTCTCCGCCGTCGCGGCGCTCTCCTCCTCCATACAAGCGCTCGCGTAGGGGCAGTCCCCGCGGCGGTTACGGACCCGATGACAGAATTGGATATGATTATTATGGTGGTTATGAACGGGGAATGGGTGGAAGGATTGGTTATGCAGATGACAAGTCTTATGGCAGGTTTGGACCTCGTTCTGCAGGGGGATATCAAAATGGGATTTCCGATATGGAATCCAATCGTGGTTATGCAGACTTGCCAAGTGGCAGTGCACAAAGAGAAGGATTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATACTACCAGCTGAAGCAGAACGTAGGTATCAAGAATATAGATCAGAGTATATTTCTACCCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGACCTAAATCCTGGTTTGAGTGCATCTTCGTCCAGCAAATCAGGGCAAGCTAGTGAGCCAAATTCAGAGGAGGAAGCAGACACTGGAGGTAAACGAAGAAGACATGGTAGGGGATCTAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTGTAAGTTCTGAACCTAGACGAATACAAGCAGATATTCAACAGGCTCAGGCCCTTGTTCGTAAGCTTGACACAGAAAAGGGGATTCAAGATAATGTTTTATGCAGCAATGATCACAATAAAAATGATGATAAGGCTCATAGTGGATCTGTGGGTCCCATCATAATTATACGAGGCCTAACTTCTGTTAAGGGCTTAGAGGGTGTTGAGCTTTTGGACACTCTTATTACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGCATGATTGAGACTATTGAGGCTAAGGGTTTTAGGCATGCAAGGCCAGAGGGAACAGGGCATGAAGAAACAGGTAAATCAGGGTCCGAATGGGAGAAGAAACTTGACTCATTTTGGCAGGGAAGGCTGAATGGTCAAGATCCCTTGGAAGTAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAGTTGAAGTGTTGGATCCGTATGTTCGAAAAATTAGGGATGAAAAGTATGGGTGGAAGTATGGTTGTGGAGCTAAGGGCTGCACGAAGCTTTTTCATGCTGCTGAATTTGTGTACAAACATCTGAAGCTAAAACACCCAGAGCTTGTACTTGAACAAACTTCAAAAGTGCGTGAGGATCTCTATTTTCAAAATTACATGAATGATCCGGATGCTCCTGGTGGAAAGCCTGTCATGCAGCAACCTCAGAAGGACAAACCCTTAAAGCGAAGATTAGGTATCGAGGGCCGATTGAGAGATGACCGTGGTAATCGTCGAGACCATGATCGGAGTGACAGAATAAATGATGGAGATAGACCTGCGATTTCTCCATCCCGTGAAAGGTCTAAAGCACTTGAGATGGGAAACCAAGATGAAACAATGTATGATACATATGCAGGGCCTGGTGTACCTCCATTCACCTCAGATATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGCCATTAGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGCTAAGAGAGCAAGGAGGAGGACCTTCTTCATATGATGCCTCTGGAAGAAAAATGCGGTCTGGCCCTCATATGGGTGGACCAGCACCAATAATTGCTGTTCCTCCAGCTTTTAGACCAGATCCTCGGCGGATGAGAAGTTACCAAGACCTGGATGCCCCAGAGGACGAGGTCACTGTGATAGACTATAGGAGTTTGTAG 2181 0.4791 MAEVINIPPDSLDKSPSSSAPPPPPPQPQPPSSSAAETDLPPPPPPPSRRRDDRDFDRPPNRRGDYYDRNMSSPPPPRDRDRDFKRRRSPSPSHRDRRYSPPSRRSPPPYKRSRRGSPRGGYGPDDRIGYDYYGGYERGMGGRIGYADDKSYGRFGPRSAGGYQNGISDMESNRGYADLPSGSAQREGLMSYKQFIQELEDDILPAEAERRYQEYRSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARQLAKDFLLDLQSGTLDLNPGLSASSSSKSGQASEPNSEEEADTGGKRRRHGRGSNKENDFSAAPKAHPVSSEPRRIQADIQQAQALVRKLDTEKGIQDNVLCSNDHNKNDDKAHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETIEAKGFRHARPEGTGHEETGKSGSEWEKKLDSFWQGRLNGQDPLEVMTAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELVLEQTSKVREDLYFQNYMNDPDAPGGKPVMQQPQKDKPLKRRLGIEGRLRDDRGNRRDHDRSDRINDGDRPAISPSRERSKALEMGNQDETMYDTYAGPGVPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGGPSSYDASGRKMRSGPHMGGPAPIIAVPPAFRPDPRRMRSYQDLDAPEDEVTVIDYRSL. 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09554 726 MobiDBLite consensus disorder prediction 15 45 - -
Seca3g09554 726 MobiDBLite consensus disorder prediction 539 609 - -
Seca3g09554 726 MobiDBLite consensus disorder prediction 276 296 - -
Seca3g09554 726 Pfam SERRATE/Ars2, N-terminal domain 193 274 IPR021933 -
Seca3g09554 726 MobiDBLite consensus disorder prediction 1 130 - -
Seca3g09554 726 MobiDBLite consensus disorder prediction 297 314 - -
Seca3g09554 726 MobiDBLite consensus disorder prediction 664 711 - -
Seca3g09554 726 MobiDBLite consensus disorder prediction 46 65 - -
Seca3g09554 726 PANTHER ARSENITE-RESISTANCE PROTEIN 2 48 724 IPR039727 GO:0006397
Seca3g09554 726 MobiDBLite consensus disorder prediction 276 334 - -
Seca3g09554 726 ProSitePatterns Zinc finger C2H2 type domain signature. 497 520 IPR013087 -
Seca3g09554 726 MobiDBLite consensus disorder prediction 74 102 - -
Seca3g09554 726 MobiDBLite consensus disorder prediction 557 608 - -
Seca3g09554 726 Pfam Arsenite-resistance protein 2 437 623 IPR007042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09554 Seca-Chr3 236617446 236624516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09554 59 726 C2H2 Transcription Factor Family AT2G27100 63.504 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09554 K27103 - gmx:100811300 1015.37