Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09535 ATGATGGGGATAGTTTATAGAGACCTTAAGCCAGAAAATGTGCTTATTCAAGAAGATGGGCATATCATGCTATCTGACTTTGATCTCTCTCTTCACTTGGAAGTTCAACCAAGCTTCTAA 120 0.3833 MMGIVYRDLKPENVLIQEDGHIMLSDFDLSLHLEVQPSF. 40
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09535 39 PANTHER FLIPPASE KINASE 1-RELATED 1 38 - -
Seca3g09535 39 ProSitePatterns Serine/Threonine protein kinases active-site signature. 4 16 IPR008271 GO:0004672|GO:0006468
Seca3g09535 39 Pfam Protein kinase domain 2 35 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g09535 39 Gene3D Transferase(Phosphotransferase) domain 1 1 38 - -
Seca3g09535 39 ProSiteProfiles Protein kinase domain profile. 1 39 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g09535 39 SUPERFAMILY Protein kinase-like (PK-like) 2 35 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09535 Seca-Chr3 236179724 236179843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09535 1 39 AGC Kinase Gene Family AT2G26700 79.487 8.23e-18 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Seca3g09535 Pkinase 1.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09535 K08286 - zof:121982439 68.9366