Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09534 ATGTTCTGTTGCAGGAATTCAGATGAGGCTATGAAAAGGAGGAAGAAAAAGACAGCACATGGAGTGGACATTGAAATGTCAGCTGAACCCATGAGTGGTAAATCACACTCATTTGTTGGGACTCTTGAGTATTTAGCATCAGAAATGATTTTGGGATTAGGCCATGGAAGTGCAGTGGATTGTGGGCATTTAGGGTGTTTCTGTATGAGCTGTTATTTGGATTTACACCTTTTAAAGATGCAAGCAATGAGAAAACATTGA 261 0.3985 MFCCRNSDEAMKRRKKKTAHGVDIEMSAEPMSGKSHSFVGTLEYLASEMILGLGHGSAVDCGHLGCFCMSCYLDLHLLKMQAMRKH. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09534 86 Gene3D Transferase(Phosphotransferase) domain 1 23 72 - -
Seca3g09534 86 PANTHER FLIPPASE KINASE 1-RELATED 12 68 - -
Seca3g09534 86 SUPERFAMILY Protein kinase-like (PK-like) 32 74 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09534 Seca-Chr3 236179416 236179676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09534 11 72 AGC Kinase Gene Family AT3G44610 52.381 3.30e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09534 K08286 - csav:115706143 64.3142