Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09519 ATGGATGACAACATCACAACTATTGTCAATGTTATCAAATGGGGTCGTGCAGTATATACAAACATTCAAAAATTAGTGCAGTTTCAGTTAACAGTCATTATTGTTGCTCTGGTGATCAACTTTGTTTCGGCATCTATAGCAGGATATGTCCTCCTAACAGCTGTGCAGTTGCTTTGGGTCAACTTGATTATGGACATTCTGTGCGCATTAGCCATGGTCACTGAGCCACTTAATGATGGACTTATAAAAAGGCCCCCAGTTGGAAAGAGAGAAAAATTTATCACCAGAGCCATGTGGAGGAATATCATTGGCCAAAGCATATTTCAAGTAATTGTCCTTACCCTTCTCAATTTTGAAGGGAAGGATATACTGCGCATAAGTGGTTCAGATGCAACTGATGTACTCAGAACTTTGATATTCAACTCCTTTGTATTTTTCCAGGTGTTCAATGAGATAAACTGCCGAGAGATAGAAAAGATAAACATTTTCAAAGGCATTCTTGACAGCTGGACATTTTTGGTAATAATTTTCTCAACAGTGGTAATTCAGGTAATCATAGTGCAGTTCCTCGGAACTTTTGCCTGCACGGTGCCTCTAAACTTGGAACTCTGGTTACTTAGTGTTTTAATTGGTGCCACTAGCATGCTTATAGCTTCTCTTCTGAAATGCATCCCAGTGAAAACAGATGTGGCTATTCACCATGAGGGTTATGAGGCACTGCCTCCACACCCCTAG 735 0.4027 MDDNITTIVNVIKWGRAVYTNIQKLVQFQLTVIIVALVINFVSASIAGYVLLTAVQLLWVNLIMDILCALAMVTEPLNDGLIKRPPVGKREKFITRAMWRNIIGQSIFQVIVLTLLNFEGKDILRISGSDATDVLRTLIFNSFVFFQVFNEINCREIEKINIFKGILDSWTFLVIIFSTVVIQVIIVQFLGTFACTVPLNLELWLLSVLIGATSMLIASLLKCIPVKTDVAIHHEGYEALPPHP. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09519 244 FunFam Calcium-transporting ATPase 1 228 - -
Seca3g09519 244 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 227 IPR023298 -
Seca3g09519 244 Gene3D - 121 234 - -
Seca3g09519 244 Gene3D - 1 120 - -
Seca3g09519 244 Pfam Cation transporting ATPase, C-terminus 51 223 IPR006068 -
Seca3g09519 244 PANTHER CATION TRANSPORTING ATPASE 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09519 Seca-Chr3 236006798 236009654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09519 1 244 Primary Pumps ATPases AT3G57330 65.984 7.91e-108 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09519 K01537 - lja:Lj0g3v0318659.2 425.631