Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g09467 | ATGGCTAAGCAGCAAATTATCAGTGCTTTTGCTTCTTCCTCTACTTCTTCTGTTGCCTCTTTGAAAAAATATGACGTTTTTCTTAGCTTTCGTGGTGAGGATACTCGCAAAAACTTCACAAGTCATTTGTATGATGCTTTGAGCCGAAAGAAAGTTGAAACATTTATAGATTATGAGCTTGAAAAAGGAGATGAGATCTCACCAGCACTTATCAAAGCAATTGAGGAGTCACATGCATCTATAGTCATCTTCTCAAAAAACTATGCTTCCTCAAAATGGTGTTTAGATGAACTCATCAAGATTCTAGAATGCAAGAAAGATCAGGGACAGATTGTTATACCTGTTTTCTACAACGTAGATCCATCACATGTGAGGAAGCAGACAGTGAGCTATAAAAAAGCCTTTGCAAAACATGAGAGAGATTTGAAGCTCAACAATGACAAGTTGCAGAAATGGAAAGCTGCTCTGACTGAAGCAGCCAATTTAACTGGTTGGGACTCTAGAACTTACAGGAATGAATCTGAATTCATTCAGCACATTGTCAAAGATGTCATGCAAAAAGTGAAGTTGAGGTACCCAAATCAATTGAAGGGACTGGTTGGAATTGAGAAGAATTATGTACCAATTGAGCGATTACTGGAAATAGGTACAAGTGAAGTTCGAATCATTGGAATATGGGGCATGGGTGGCATAGGGAAGACCACCCTTGCCACTGCCTTATATGCCAAACTGTCTTCTCAGTTTGAAGGTCATTGCTTCCTTGAAAATGTAAGGGAACAATCAGACAAGAATGGACTCAATGTTTTAGGTAATGAACTTTTTTCTAAGTTGTTAGAGGAAAAATGTCTTTGTCTTCATGCACCCAAAGTTGAAACCCCTTACCTCATGAGTAGGCTTGGACGTAAACAAGTTTTCATCGTGTTGGATGATGTGGCTACCTCAGAGCAATTAGAAGCTCTAATAGATAAGGATTGCTTGGGACCAGGAAGTAGAGTCATTGTTACAACTAGAGACAAGCACATATTTAGTCAAGTTGATGAAATATATGAGGTCGATAGTTTAAACTTTGATGACTCTCTTCACCTTTTTTGTTTGCATGCCTTTAGACAGAAGCATCCTGAAATTGGATTTGAAGGTCTATCAGAAAGTGCTGTAAATTATTGCAACGGTGTTCCTTTGGCTTTAAAAGTTTTAGGATCAAATCTTCGTTCAAGAAGCAAAGCAGCATGGGAAGATGAATTGAGAAAGCTCCAAAAGTTTTCCAATGTGGAAATTCATAAGGTGTTGAAATTGAGTTATGATGACTTAGATCCTACTCAGAAGGACATATTTCTAGACATTGCGTGTTTCTTCAAAGGATGGCCTCTAGAAGATGTAACAAGTATATTGGAAGCTTGTGATTTCTTTCCAGCAAGTGGGATAGAAACCCTTATAGACAAAGCTCTCATAACCATTTCATATGACCAGAAAATGGAAATGCATGACTTAATACGAGAAATGGGTCAGGAGATTGTTAACCAAGAATGTATCAAAAACCCTGGAAAACGAAGTCGGTTGTGGAAAAGTGAAGAAGTGTTTGATGTATTGAAAAATAACAGGGGAACTGAAATTGTTGAAGGCATAATTTTCAATATGTGTGATGTTGAGAAGATTCTGCATTTGAGTTCTGATTCCTTTAAAAGGATGACTAACTTAAGATATCTCATAATCTATTATGGGAATATTCATGAACCTGAGACTAAGGTGTACCTTCCTAACAATTTGGAGTTTTTGTCTGATAAATTGAGGTACCTTCGTTGGGATGGATTTTGTCTTGAGTCTTTGCCATCTACCTTTTCTGCTGAAATGCTTGTAGAGTTTTCCATGCCTTTCAGCAATCTTAAAAAACTTTGGGATGGAGTTCAGAATCTTATAAATTTGAAGAAAATTGACCTTTCCTGGTCCCGACACCTGGTTGAGGTCCCAGACTTATCAAGGGCTACGAATCTTGAAATAGTGCACCTTGTTCGTTGTTCAGGCTTGTGTAAGCTCCATCCATCCATTTTATCTCTCCCCAAGCTTACACGTCTAGATTTAACACACTGCAGAGAGATTGAAAGCCATGAAATCAATGTTCAATCAAAATCTCTCCGCTTCCTAGGACTTGGCGGTTTATCTGTCAAGGAATTTTCAGTGATGTCAAAGGAAATGACAGAGCTGAGTGTAACTGTCACTGCTATACATGAATTGCCACCATCAATTTGGCATAATAGCAAACTCATTTCTATTTGCCTACAACGATGTGGCAATCTTAACATTAATGGGAACAAGTTATCCAATCATCCAAGATTGTGGTCTCTCAGAGAACTGAGCCTTTCTGGGTGCACACAAATCAATGCATTAGATCTGCAGTTCATCTTTGATGTCATGCAATGTTTAATATACCTAGATTTGTCAAACTGTTGCAACATAAGAGCACTCCCTGACAACACCAAAAACCTTTCAAGTTTGACAAGGCTTTATTTAGATGATTGCAGGAATCTTGTGTCTCTACCAGAGCTTCCATCATCCCTGGAAAAGTTGAGTGCCTTGAATTGCACTTCTCTAGAGGGAGACTTCACTATTCATAGGCTAGTGAATGAGCACATGTTTCAAAACTTGCCTGAAAAGGGTTATATCATTAAGTCTGTTGTATTCCCTGGAGCCAAAGTTCCGGATTTGTTTAGCTTTCGTACATCAGGGGCTTCAATAACAATTTCTCATGATCCAAAAGTTCATTTGCAGGGTTTCATTTTTTGCGTCATTCTTTCTGATGGAATCTTCGATGGTATCAGTGAGATTATTATTAATATTATATCTGAAAACGACCAAGTGCTTGGAGAACACAGTCACCATCTATGGGATAAAAGTTTGATTTCAGATCATGTGGTGTGTCGGTATGGTAACAATTTCAGATCATTTGATCAGTGCAAATTATCATTTGAATTCAAATTACAATCGTATTTTGGAGAACTGTCAACAGTGGGGATAAAGGGGTGTGGGGTCTTCCCAGTCCATAAAGGGAAAGGAAGAGGACTTGAACAACTTACTCCTAGAAAGAAGAGGAAGAGAGAACTTGACTAA | 3102 | 0.3827 | MAKQQIISAFASSSTSSVASLKKYDVFLSFRGEDTRKNFTSHLYDALSRKKVETFIDYELEKGDEISPALIKAIEESHASIVIFSKNYASSKWCLDELIKILECKKDQGQIVIPVFYNVDPSHVRKQTVSYKKAFAKHERDLKLNNDKLQKWKAALTEAANLTGWDSRTYRNESEFIQHIVKDVMQKVKLRYPNQLKGLVGIEKNYVPIERLLEIGTSEVRIIGIWGMGGIGKTTLATALYAKLSSQFEGHCFLENVREQSDKNGLNVLGNELFSKLLEEKCLCLHAPKVETPYLMSRLGRKQVFIVLDDVATSEQLEALIDKDCLGPGSRVIVTTRDKHIFSQVDEIYEVDSLNFDDSLHLFCLHAFRQKHPEIGFEGLSESAVNYCNGVPLALKVLGSNLRSRSKAAWEDELRKLQKFSNVEIHKVLKLSYDDLDPTQKDIFLDIACFFKGWPLEDVTSILEACDFFPASGIETLIDKALITISYDQKMEMHDLIREMGQEIVNQECIKNPGKRSRLWKSEEVFDVLKNNRGTEIVEGIIFNMCDVEKILHLSSDSFKRMTNLRYLIIYYGNIHEPETKVYLPNNLEFLSDKLRYLRWDGFCLESLPSTFSAEMLVEFSMPFSNLKKLWDGVQNLINLKKIDLSWSRHLVEVPDLSRATNLEIVHLVRCSGLCKLHPSILSLPKLTRLDLTHCREIESHEINVQSKSLRFLGLGGLSVKEFSVMSKEMTELSVTVTAIHELPPSIWHNSKLISICLQRCGNLNINGNKLSNHPRLWSLRELSLSGCTQINALDLQFIFDVMQCLIYLDLSNCCNIRALPDNTKNLSSLTRLYLDDCRNLVSLPELPSSLEKLSALNCTSLEGDFTIHRLVNEHMFQNLPEKGYIIKSVVFPGAKVPDLFSFRTSGASITISHDPKVHLQGFIFCVILSDGIFDGISEIIINIISENDQVLGEHSHHLWDKSLISDHVVCRYGNNFRSFDQCKLSFEFKLQSYFGELSTVGIKGCGVFPVHKGKGRGLEQLTPRKKRKRELD. | 1034 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g09467 | 1033 | Gene3D | Ribonuclease Inhibitor | 709 | 867 | IPR032675 | - | |
Seca3g09467 | 1033 | SMART | till_3 | 23 | 162 | IPR000157 | GO:0007165 | |
Seca3g09467 | 1033 | Gene3D | - | 186 | 352 | IPR027417 | - | |
Seca3g09467 | 1033 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 20 | 190 | - | - | |
Seca3g09467 | 1033 | Pfam | Leucine Rich Repeat | 617 | 635 | IPR011713 | - | |
Seca3g09467 | 1033 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 191 | 447 | IPR027417 | - | |
Seca3g09467 | 1033 | ProSiteProfiles | TIR domain profile. | 22 | 188 | IPR000157 | GO:0007165 | |
Seca3g09467 | 1033 | Gene3D | - | 21 | 185 | IPR035897 | - | |
Seca3g09467 | 1033 | Gene3D | Ribonuclease Inhibitor | 542 | 708 | IPR032675 | - | |
Seca3g09467 | 1033 | PRINTS | Disease resistance protein signature | 682 | 698 | - | - | |
Seca3g09467 | 1033 | PRINTS | Disease resistance protein signature | 298 | 312 | - | - | |
Seca3g09467 | 1033 | PRINTS | Disease resistance protein signature | 388 | 402 | - | - | |
Seca3g09467 | 1033 | PRINTS | Disease resistance protein signature | 222 | 237 | - | - | |
Seca3g09467 | 1033 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 355 | 437 | - | - | |
Seca3g09467 | 1033 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 14 | 165 | IPR035897 | - | |
Seca3g09467 | 1033 | Pfam | NB-ARC domain | 209 | 435 | IPR002182 | GO:0043531 | |
Seca3g09467 | 1033 | SUPERFAMILY | L domain-like | 493 | 861 | - | - | |
Seca3g09467 | 1033 | Gene3D | - | 353 | 437 | IPR042197 | - | |
Seca3g09467 | 1033 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 24 | 764 | IPR044974 | GO:0006952 | |
Seca3g09467 | 1033 | Pfam | TIR domain | 23 | 198 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g09467 | Seca-Chr3 | 235180799 | 235187874 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g09467 | 19 | 858 | WRKY Transcription Factor Family | AT4G12020 | 32.417 | 3.53e-106 | 363 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g09467 | - | - | cam:101499873 | 1093.18 |